SMTL ID : 1rrm.1

Crystal Structure of Lactaldehyde reductase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: D.196, H.200, H.263, H.277, N.281 Ligands: PGO.4 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.196, A:H.200, A:H.263, A:H.277, H2O.13 ZN.5: 6 residues within 4Å: Chain B: D.196, H.200, H.263, H.277, N.281 Ligands: PGO.8 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.196, B:H.200, B:H.263, B:H.277, H2O.18

2 x FE2: FE (II) ION(Non-covalent)

FE2.2: 2 residues within 4Å: Chain A: L.259, C.362 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:C.362 FE2.6: 2 residues within 4Å: Chain B: L.259, C.362 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:C.362

2 x APR: ADENOSINE-5-DIPHOSPHORIBOSE(Non-covalent)

APR.3: 24 residues within 4Å: Chain A: D.39, T.41, L.42, P.70, N.71, P.72, G.97, G.98, S.99, P.100, D.102, T.140, T.141, T.144, V.153, K.162, M.181, G.184, M.185, P.186, L.189, T.193, H.277 Ligands: PGO.4 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:T.41, A:N.71, A:N.71, A:G.97, A:G.98, A:S.99, A:S.99, A:T.140, A:T.141, A:T.141, A:K.162, A:K.162, A:H.277 Water bridges: A:T.41, A:T.41, A:Q.101, A:D.102, A:G.184, A:G.278 Salt bridges: A:H.277 APR.7: 24 residues within 4Å: Chain B: D.39, T.41, L.42, P.70, N.71, P.72, G.97, G.98, S.99, P.100, D.102, T.140, T.141, T.144, V.153, K.162, M.181, G.184, M.185, P.186, L.189, T.193, H.277 Ligands: PGO.8 21 PLIP interactions: 21 interactions with chain B Hydrogen bonds: B:T.41, B:N.71, B:N.71, B:G.97, B:G.98, B:S.99, B:S.99, B:T.140, B:T.140, B:T.141, B:K.162, B:K.162, B:H.277 Water bridges: B:T.41, B:T.41, B:Q.101, B:D.102, B:D.102, B:G.184, B:G.278 Salt bridges: B:H.277

2 x PGO: S-1,2-PROPANEDIOL(Non-covalent)

PGO.4: 7 residues within 4Å: Chain A: N.151, H.200, F.254, H.263, H.277 Ligands: ZN.1, APR.3 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:N.151, A:F.254 Water bridges: A:H.267 PGO.8: 7 residues within 4Å: Chain B: N.151, H.200, F.254, H.263, H.277 Ligands: ZN.5, APR.7 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:N.151, B:F.254 Water bridges: B:H.267

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kumaran, D. et al., Crystal structure of Lactaldehyde reductase. To be Published

Release Date

2004-08-17

Peptides

Lactaldehyde reductase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Lactaldehyde reductase