SMTL ID : 1rtw.1

X-ray Structure of PF1337, a TenA Homologue from Pyrococcus furiosus. Northeast Structural Genomics Research Consortium (Nesg) Target PFR34

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

homo-tetramer

Ligands

1 x MP5: (4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL DIHYDROGEN PHOSPHATE(Non-covalent)

MP5.1: 14 residues within 4Å: Chain A: D.43, F.46, V.47, A.50, I.76, E.79, Y.105, E.128, E.129, Y.132, W.156, F.161, E.198, F.201 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:Y.105, A:F.201 Hydrogen bonds: A:D.43, A:E.128, A:E.129 pi-Stacking: A:F.46, A:Y.132

3 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 9 residues within 4Å: Chain B: F.46, V.47, A.50, I.76, E.79, E.128, E.129, W.156, F.161 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:E.129 Water bridges: B:D.43 PO4.3: 8 residues within 4Å: Chain C: V.47, A.50, I.76, E.79, E.128, E.129, W.156, F.161 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:E.129 Water bridges: C:D.43 PO4.4: 8 residues within 4Å: Chain D: V.47, A.50, I.76, E.79, E.128, E.129, W.156, F.161 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:E.129

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Benach, J. et al., The 2.35 A structure of the TenA homolog from Pyrococcus furiosus supports an enzymatic function in thiamine metabolism. Acta Crystallogr.,Sect.D (2005)

Release Date

2004-01-13

Peptides

transcriptional activator, putative: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

transcriptional activator, putative