- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.95 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x PO4: PHOSPHATE ION(Non-functional Binders)
- 4 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)
PLP.2: 17 residues within 4Å:- Chain A: S.118, G.119, S.120, H.147, T.201, S.202, D.227, A.229, H.230, T.253, H.255, K.256
- Chain B: Y.72, Y.117, G.301, G.302
- Ligands: PO4.1
16 PLIP interactions:12 interactions with chain A, 4 interactions with chain B- Hydrophobic interactions: A:A.229, A:K.256
- Hydrogen bonds: A:G.119, A:S.120, A:S.120, A:N.123, A:H.230, B:Y.72, B:Y.117, B:G.301, B:G.302
- Water bridges: A:S.118, A:S.118
- Salt bridges: A:H.255, A:K.256
- pi-Stacking: A:H.147
PLP.4: 17 residues within 4Å:- Chain A: Y.72, Y.117, G.301, G.302
- Chain B: S.118, G.119, S.120, H.147, T.201, S.202, D.227, A.229, H.230, T.253, H.255, K.256
- Ligands: PO4.3
15 PLIP interactions:11 interactions with chain B, 4 interactions with chain A- Hydrophobic interactions: B:A.229, B:K.256
- Hydrogen bonds: B:S.118, B:G.119, B:S.120, B:S.120, B:N.123, B:H.230, A:G.301, A:G.302
- Salt bridges: B:H.255, B:K.256
- pi-Stacking: B:H.147
- Water bridges: A:Y.117, A:Y.117
PLP.6: 17 residues within 4Å:- Chain C: S.118, G.119, S.120, H.147, T.201, S.202, D.227, A.229, H.230, T.253, H.255, K.256
- Chain D: Y.72, Y.117, G.301, G.302
- Ligands: PO4.5
13 PLIP interactions:4 interactions with chain D, 9 interactions with chain C- Hydrogen bonds: D:G.301, D:G.302, C:G.119, C:S.120, C:S.120, C:N.123
- Water bridges: D:Y.117, D:Y.117
- Hydrophobic interactions: C:A.229, C:K.256
- Salt bridges: C:H.255, C:K.256
- pi-Stacking: C:H.147
PLP.8: 17 residues within 4Å:- Chain C: Y.72, Y.117, G.301, G.302
- Chain D: S.118, G.119, S.120, H.147, T.201, S.202, D.227, A.229, H.230, T.253, H.255, K.256
- Ligands: PO4.7
15 PLIP interactions:4 interactions with chain C, 11 interactions with chain D- Hydrogen bonds: C:Y.72, C:Y.117, C:G.301, C:G.302, D:S.118, D:G.119, D:S.120, D:S.120, D:N.123, D:H.230
- Hydrophobic interactions: D:A.229, D:K.256
- Salt bridges: D:H.255, D:K.256
- pi-Stacking: D:H.147
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Szebenyi, D.M. et al., Serine Hydroxymethyltransferase: Role of Glu75 and Evidence that Serine Is Cleaved by a Retroaldol Mechanism. Biochemistry (2004)
- Release Date
- 2004-06-15
- Peptides
- Serine hydroxymethyltransferase, cytosolic: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.95 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x PO4: PHOSPHATE ION(Non-functional Binders)
- 4 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Szebenyi, D.M. et al., Serine Hydroxymethyltransferase: Role of Glu75 and Evidence that Serine Is Cleaved by a Retroaldol Mechanism. Biochemistry (2004)
- Release Date
- 2004-06-15
- Peptides
- Serine hydroxymethyltransferase, cytosolic: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B