SMTL ID : 1rz7.1

CRYSTAL STRUCTURE OF HUMAN ANTI-HIV-1 GP120-REACTIVE ANTIBODY 48D

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-oligomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 12 residues within 4Å: Chain A: Q.159, E.160, S.161, S.175, S.176, T.177 Chain B: F.172, P.173, V.175, S.183, L.184, S.185 6 PLIP interactions: 3 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:F.172, B:S.183, B:S.185, A:Q.159, A:S.161, A:T.177 GOL.2: 8 residues within 4Å: Chain A: Q.37, K.45, L.47, P.59, R.61, F.62, E.81, D.82 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.37, A:K.45, A:R.61, A:E.81

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, C.C. et al., Structural basis of tyrosine sulfation and VH-gene usage in antibodies that recognize the HIV type 1 coreceptor-binding site on gp120. Proc.Natl.Acad.Sci.USA (2004)

Release Date

2004-02-03

Peptides

Fab 48d light chain: A
Fab 48d heavy chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

Fab 48d light chain

Fab 48d heavy chain

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