SMTL ID : 1rzl.1

RICE NONSPECIFIC LIPID TRANSFER PROTEIN

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: T.2, G.4 Chain B: P.12, S.24, A.26 8 PLIP interactions: 5 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:S.24, A:C.3, A:G.4, A:Q.5 Water bridges: B:P.12, B:S.24, B:A.25, B:A.26 SO4.4: 5 residues within 4Å: Chain A: P.12, S.24, A.26 Chain B: T.2, G.4 9 PLIP interactions: 4 interactions with chain B, 5 interactions with chain A Hydrogen bonds: B:T.2, B:C.3, B:G.4, B:Q.5, A:S.24 Water bridges: A:P.12, A:S.24, A:A.25, A:A.26

4 x CXS: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID(Non-covalent)

CXS.2: 4 residues within 4Å: Chain A: S.84, I.85, D.86, R.89 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:D.86 Hydrogen bonds: A:S.84, A:D.86 Water bridges: A:R.89, A:R.89 Salt bridges: A:R.89 CXS.3: 6 residues within 4Å: Chain A: A.21, G.22, P.23, A.25, C.28, K.72 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:A.25 Hydrogen bonds: A:G.22 CXS.5: 4 residues within 4Å: Chain B: S.84, I.85, D.86, R.89 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:D.86 Hydrogen bonds: B:S.84, B:D.86 Water bridges: B:R.89, B:R.89 Salt bridges: B:R.89 CXS.6: 6 residues within 4Å: Chain B: A.21, G.22, P.23, A.25, C.28, K.72 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:A.25 Hydrogen bonds: B:G.22

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, J.Y. et al., Rice non-specific lipid transfer protein: the 1.6 A crystal structure in the unliganded state reveals a small hydrophobic cavity. J.Mol.Biol. (1998)

Release Date

1998-12-16

Peptides

NONSPECIFIC LIPID TRANSFER PROTEIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

NONSPECIFIC LIPID TRANSFER PROTEIN

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