SMTL ID : 1s0v.3 (3 other biounits)

Structural basis for substrate selection by T7 RNA polymerase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)

MG.1: 1 residues within 4Å: Ligands: APC.3 No protein-ligand interaction detected (PLIP) MG.2: 4 residues within 4Å: Chain B: U.12 Chain D: M.635, Y.639 Ligands: APC.3 1 PLIP interactions: 1 interactions with chain D Metal complexes: D:Y.639

1 x APC: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER(Non-covalent)

APC.3: 14 residues within 4Å: Chain A: T.10, A.11 Chain B: U.12 Chain D: D.471, K.472, Y.571, R.627, K.631, R.632, M.635, T.636, Y.639 Ligands: MG.1, MG.2 9 PLIP interactions: 9 interactions with chain D Hydrogen bonds: D:K.631, D:K.631, D:R.632, D:R.632, D:Q.649 Water bridges: D:K.472 Salt bridges: D:K.472, D:R.627, D:K.631

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Temiakov, D. et al., Structural basis for substrate selection by t7 RNA polymerase. Cell(Cambridge,Mass.) (2004)

Release Date

2004-02-24

Peptides

DNA-directed RNA polymerase: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

D
C

DNA-directed RNA polymerase

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