SMTL ID : 1s17.1 (1 other biounit)

Identification of Novel Potent Bicyclic Peptide Deformylase Inhibitors

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x NI: NICKEL (II) ION(Non-covalent)

NI.1: 5 residues within 4Å: Chain A: Q.63, C.104, H.146, H.150 Ligands: GNR.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.104, A:H.146, A:H.150

1 x GNR: 2-(3,4-DIHYDRO-3-OXO-2H-BENZO[B][1,4]THIAZIN-2-YL)-N-HYDROXYACETAMIDE(Non-covalent)

GNR.2: 15 residues within 4Å: Chain A: G.56, I.57, G.58, Q.63, Y.100, Q.101, E.102, G.103, C.104, L.105, V.142, H.146, E.147, H.150 Ligands: NI.1 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:I.57, A:Y.100, A:E.102, A:L.105, A:V.142 Hydrogen bonds: A:I.57, A:Q.63, A:L.105, A:E.147

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: R.83, V.84, D.126, R.127, F.132 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:V.84, A:R.127, A:R.127 Water bridges: A:E.134

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Molteni, V. et al., Identification of novel potent bicyclic peptide deformylase inhibitors. Bioorg.Med.Chem.Lett. (2004)

Release Date

2004-03-30

Peptides

Peptide deformylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptide deformylase

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