SMTL ID : 1s96.2 (1 other biounit)

The 2.0 A X-ray structure of Guanylate Kinase from E.coli

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-hexamer

Ligands

6 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 5 residues within 4Å: Chain A: S.25, G.26, A.27, G.28 Ligands: UNX.2 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.26, A:G.28 Water bridges: A:K.29, A:K.29, A:S.30 PO4.3: 4 residues within 4Å: Chain B: S.25, G.26, A.27, G.28 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:G.26, B:G.28 Water bridges: B:A.27, B:K.29, B:K.29, B:S.30 PO4.4: 5 residues within 4Å: Chain C: S.25, G.26, A.27, G.28 Ligands: UNX.5 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:G.26, C:G.28 Water bridges: C:K.29, C:K.29, C:S.30 PO4.6: 4 residues within 4Å: Chain D: S.25, G.26, A.27, G.28 6 PLIP interactions: 6 interactions with chain D Hydrogen bonds: D:G.26, D:G.28 Water bridges: D:A.27, D:K.29, D:K.29, D:S.30 PO4.7: 5 residues within 4Å: Chain E: S.25, G.26, A.27, G.28 Ligands: UNX.8 5 PLIP interactions: 5 interactions with chain E Hydrogen bonds: E:G.26, E:G.28 Water bridges: E:K.29, E:K.29, E:S.30 PO4.9: 4 residues within 4Å: Chain F: S.25, G.26, A.27, G.28 6 PLIP interactions: 6 interactions with chain F Hydrogen bonds: F:G.26, F:G.28 Water bridges: F:A.27, F:K.29, F:K.29, F:S.30

3 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.2: 3 residues within 4Å: Chain A: K.29, S.30 Ligands: PO4.1 No protein-ligand interaction detected (PLIP) UNX.5: 3 residues within 4Å: Chain C: K.29, S.30 Ligands: PO4.4 No protein-ligand interaction detected (PLIP) UNX.8: 3 residues within 4Å: Chain E: K.29, S.30 Ligands: PO4.7 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kreusch, A. et al., The Structure of Guanylate Kinase from Escherichia coli at 2.0 A resolution. To be Published

Release Date

2004-02-10

Peptides

Guanylate kinase: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

E
A

F
B

Guanylate kinase

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