- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-octamer
- Ligands
- 8 x NA: SODIUM ION(Non-functional Binders)
- 8 x ACP: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER(Non-covalent)
ACP.2: 15 residues within 4Å:- Chain A: H.154, H.182, G.184, G.185, G.186, R.214, S.254, D.255, A.256, R.257, G.304, L.305, H.307, E.308
- Chain G: E.22
10 PLIP interactions:7 interactions with chain A, 3 interactions with chain G- Hydrogen bonds: A:H.154, A:H.182, A:G.185, A:G.186, A:S.254, A:A.256, A:G.304, G:E.22, G:R.347
- Water bridges: G:R.347
ACP.8: 15 residues within 4Å:- Chain B: H.154, H.182, G.184, G.185, G.186, R.214, S.254, D.255, A.256, R.257, G.304, L.305, H.307, E.308
- Chain H: E.22
10 PLIP interactions:3 interactions with chain H, 7 interactions with chain B- Hydrogen bonds: H:E.22, H:R.347, B:H.154, B:H.182, B:G.185, B:G.186, B:S.254, B:A.256, B:G.304
- Water bridges: H:R.347
ACP.14: 15 residues within 4Å:- Chain C: H.154, H.182, G.184, G.185, G.186, R.214, S.254, D.255, A.256, R.257, G.304, L.305, H.307, E.308
- Chain E: E.22
10 PLIP interactions:7 interactions with chain C, 3 interactions with chain E- Hydrogen bonds: C:H.154, C:H.182, C:G.185, C:G.186, C:S.254, C:A.256, C:G.304, E:E.22, E:R.347
- Water bridges: E:R.347
ACP.20: 15 residues within 4Å:- Chain D: H.154, H.182, G.184, G.185, G.186, R.214, S.254, D.255, A.256, R.257, G.304, L.305, H.307, E.308
- Chain F: E.22
10 PLIP interactions:7 interactions with chain D, 3 interactions with chain F- Hydrogen bonds: D:H.154, D:H.182, D:G.185, D:G.186, D:S.254, D:A.256, D:G.304, F:E.22, F:R.347
- Water bridges: F:R.347
ACP.26: 15 residues within 4Å:- Chain C: E.22
- Chain E: H.154, H.182, G.184, G.185, G.186, R.214, S.254, D.255, A.256, R.257, G.304, L.305, H.307, E.308
9 PLIP interactions:2 interactions with chain C, 7 interactions with chain E- Hydrogen bonds: C:E.22, C:R.347, E:H.154, E:H.182, E:G.185, E:G.186, E:S.254, E:A.256, E:G.304
ACP.32: 15 residues within 4Å:- Chain D: E.22
- Chain F: H.154, H.182, G.184, G.185, G.186, R.214, S.254, D.255, A.256, R.257, G.304, L.305, H.307, E.308
9 PLIP interactions:7 interactions with chain F, 2 interactions with chain D- Hydrogen bonds: F:H.154, F:H.182, F:G.185, F:G.186, F:S.254, F:A.256, F:G.304, D:E.22, D:R.347
ACP.38: 15 residues within 4Å:- Chain A: E.22
- Chain G: H.154, H.182, G.184, G.185, G.186, R.214, S.254, D.255, A.256, R.257, G.304, L.305, H.307, E.308
9 PLIP interactions:7 interactions with chain G, 2 interactions with chain A- Hydrogen bonds: G:H.154, G:H.182, G:G.185, G:G.186, G:S.254, G:A.256, G:G.304, A:E.22, A:R.347
ACP.44: 15 residues within 4Å:- Chain B: E.22
- Chain H: H.154, H.182, G.184, G.185, G.186, R.214, S.254, D.255, A.256, R.257, G.304, L.305, H.307, E.308
9 PLIP interactions:7 interactions with chain H, 2 interactions with chain B- Hydrogen bonds: H:H.154, H:H.182, H:G.185, H:G.186, H:S.254, H:A.256, H:G.304, B:E.22, B:R.347
- 32 x FMT: FORMIC ACID(Non-functional Binders)
FMT.3: 6 residues within 4Å:- Chain A: R.74, D.128, H.154, A.155, L.156, E.334
Ligand excluded by PLIPFMT.4: 4 residues within 4Å:- Chain A: R.257, R.261
- Chain G: F.2, R.347
Ligand excluded by PLIPFMT.5: 3 residues within 4Å:- Chain A: N.177, R.193, K.194
Ligand excluded by PLIPFMT.6: 3 residues within 4Å:- Chain A: R.275, W.315, R.319
Ligand excluded by PLIPFMT.9: 6 residues within 4Å:- Chain B: R.74, D.128, H.154, A.155, L.156, E.334
Ligand excluded by PLIPFMT.10: 4 residues within 4Å:- Chain B: R.257, R.261
- Chain H: F.2, R.347
Ligand excluded by PLIPFMT.11: 3 residues within 4Å:- Chain B: N.177, R.193, K.194
Ligand excluded by PLIPFMT.12: 3 residues within 4Å:- Chain B: R.275, W.315, R.319
Ligand excluded by PLIPFMT.15: 6 residues within 4Å:- Chain C: R.74, D.128, H.154, A.155, L.156, E.334
Ligand excluded by PLIPFMT.16: 4 residues within 4Å:- Chain C: R.257, R.261
- Chain E: F.2, R.347
Ligand excluded by PLIPFMT.17: 3 residues within 4Å:- Chain C: N.177, R.193, K.194
Ligand excluded by PLIPFMT.18: 3 residues within 4Å:- Chain C: R.275, W.315, R.319
Ligand excluded by PLIPFMT.21: 6 residues within 4Å:- Chain D: R.74, D.128, H.154, A.155, L.156, E.334
Ligand excluded by PLIPFMT.22: 4 residues within 4Å:- Chain D: R.257, R.261
- Chain F: F.2, R.347
Ligand excluded by PLIPFMT.23: 3 residues within 4Å:- Chain D: N.177, R.193, K.194
Ligand excluded by PLIPFMT.24: 3 residues within 4Å:- Chain D: R.275, W.315, R.319
Ligand excluded by PLIPFMT.27: 6 residues within 4Å:- Chain E: R.74, D.128, H.154, A.155, L.156, E.334
Ligand excluded by PLIPFMT.28: 4 residues within 4Å:- Chain C: F.2, R.347
- Chain E: R.257, R.261
Ligand excluded by PLIPFMT.29: 3 residues within 4Å:- Chain E: N.177, R.193, K.194
Ligand excluded by PLIPFMT.30: 3 residues within 4Å:- Chain E: R.275, W.315, R.319
Ligand excluded by PLIPFMT.33: 6 residues within 4Å:- Chain F: R.74, D.128, H.154, A.155, L.156, E.334
Ligand excluded by PLIPFMT.34: 4 residues within 4Å:- Chain D: F.2, R.347
- Chain F: R.257, R.261
Ligand excluded by PLIPFMT.35: 3 residues within 4Å:- Chain F: N.177, R.193, K.194
Ligand excluded by PLIPFMT.36: 3 residues within 4Å:- Chain F: R.275, W.315, R.319
Ligand excluded by PLIPFMT.39: 6 residues within 4Å:- Chain G: R.74, D.128, H.154, A.155, L.156, E.334
Ligand excluded by PLIPFMT.40: 4 residues within 4Å:- Chain A: F.2, R.347
- Chain G: R.257, R.261
Ligand excluded by PLIPFMT.41: 3 residues within 4Å:- Chain G: N.177, R.193, K.194
Ligand excluded by PLIPFMT.42: 3 residues within 4Å:- Chain G: R.275, W.315, R.319
Ligand excluded by PLIPFMT.45: 6 residues within 4Å:- Chain H: R.74, D.128, H.154, A.155, L.156, E.334
Ligand excluded by PLIPFMT.46: 4 residues within 4Å:- Chain B: F.2, R.347
- Chain H: R.257, R.261
Ligand excluded by PLIPFMT.47: 3 residues within 4Å:- Chain H: N.177, R.193, K.194
Ligand excluded by PLIPFMT.48: 3 residues within 4Å:- Chain H: R.275, W.315, R.319
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Diao, J. et al., Crystal structure of butyrate kinase 2 from Thermotoga maritima, a member of the ASKHA superfamily of phosphotransferases. J.Bacteriol. (2009)
- Release Date
- 2005-03-29
- Peptides
- Probable butyrate kinase 2: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-octamer
- Ligands
- 8 x NA: SODIUM ION(Non-functional Binders)
- 8 x ACP: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER(Non-covalent)
- 32 x FMT: FORMIC ACID(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Diao, J. et al., Crystal structure of butyrate kinase 2 from Thermotoga maritima, a member of the ASKHA superfamily of phosphotransferases. J.Bacteriol. (2009)
- Release Date
- 2005-03-29
- Peptides
- Probable butyrate kinase 2: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
A