SMTL ID : 1sfc.2 (2 other biounits)

NEURONAL SYNAPTIC FUSION COMPLEX

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

5 x SR: STRONTIUM ION(Non-functional Binders)

SR.1: 2 residues within 4Å: Chain B: D.63, E.66 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.63, B:E.66, H2O.1 SR.2: 2 residues within 4Å: Chain B: D.35, D.39 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.35, B:D.39, H2O.1 SR.4: 4 residues within 4Å: Chain C: D.51, E.55 Ligands: SR.5, SR.6 2 PLIP interactions: 2 interactions with chain C Metal complexes: C:D.51, C:E.55 SR.5: 2 residues within 4Å: Chain C: D.51 Ligands: SR.4 No protein-ligand interaction detected (PLIP) SR.6: 2 residues within 4Å: Chain C: E.55 Ligands: SR.4 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:E.55

2 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.3: 5 residues within 4Å: Chain A: D.68, Q.71 Chain B: Y.56, N.57, H.60 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:Y.56 Hydrogen bonds: B:N.57, A:Q.71 MPD.7: 4 residues within 4Å: Chain B: E.66 Chain C: H.66, Q.69, D.70 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:Q.69, C:D.70, C:D.70

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sutton, R.B. et al., Crystal structure of a SNARE complex involved in synaptic exocytosis at 2.4 A resolution. Nature (1998)

Release Date

1998-10-28

Peptides

PROTEIN (SYNAPTOBREVIN 2): A
PROTEIN (SYNTAXIN 1A): B
PROTEIN (SNAP-25B): C
PROTEIN (SNAP-25B): D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

C
G

D
H

PROTEIN (SYNAPTOBREVIN 2)

PROTEIN (SYNTAXIN 1A)

PROTEIN (SNAP-25B)

PROTEIN (SNAP-25B)

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