SMTL ID : 1sgj.1

Crystal structure of citrate lyase beta subunit

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.84 Å

Oligo State

homo-trimer

Ligands

3 x OAA: OXALOACETATE ION(Non-covalent)

OAA.1: 9 residues within 4Å: Chain A: D.36, D.39, R.74, E.129, Y.150, V.193, L.219, I.221 Ligands: MG.2 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.193, A:I.221 Hydrogen bonds: A:D.36, A:R.74, A:R.74 Water bridges: A:E.129 Salt bridges: A:R.74, A:R.74 OAA.3: 9 residues within 4Å: Chain B: D.36, D.39, R.74, E.129, Y.150, V.193, L.219, I.221 Ligands: MG.4 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:V.193, B:I.221 Hydrogen bonds: B:D.39, B:R.74, B:R.74 Salt bridges: B:R.74, B:R.74 OAA.5: 8 residues within 4Å: Chain C: D.39, R.74, E.129, Y.150, V.193, L.219, I.221 Ligands: MG.6 7 PLIP interactions: 7 interactions with chain C Hydrophobic interactions: C:V.193 Hydrogen bonds: C:R.74, C:R.74 Water bridges: C:E.154, C:E.154 Salt bridges: C:R.74, C:R.74

3 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 5 residues within 4Å: Chain A: D.39, R.74, E.129, Y.150 Ligands: OAA.1 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.129, H2O.3 MG.4: 5 residues within 4Å: Chain B: D.39, R.74, E.129, Y.150 Ligands: OAA.3 2 PLIP interactions: 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.129, H2O.8 MG.6: 6 residues within 4Å: Chain C: D.39, R.74, E.129, Y.150, D.155 Ligands: OAA.5 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:E.129

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eswaramoorthy, S. et al., Crystal structure of citrate lyase beta subunit. To be Published

Release Date

2004-08-17

Peptides

citrate lyase, beta subunit: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

citrate lyase, beta subunit