- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-octamer
- Ligands
- 8 x MG: MAGNESIUM ION(Non-covalent)
- 8 x SMG: N-SUCCINYL METHIONINE(Non-covalent)
SMG.5: 19 residues within 4Å:- Chain A: F.19, T.21, F.23, M.50, Y.55, S.135, K.161, K.163, D.189, N.191, E.214, D.239, K.263, G.291, M.292, I.293, D.316, F.323
- Ligands: MG.1
20 PLIP interactions:20 interactions with chain A- Hydrophobic interactions: A:I.293, A:F.323
- Hydrogen bonds: A:S.135, A:K.161, A:K.163, A:N.191, A:N.261, A:K.263, A:G.291, A:G.291, A:I.293
- Water bridges: A:N.191, A:G.291, A:E.294, A:R.299, A:R.299
- Salt bridges: A:K.161, A:K.163, A:K.263, A:R.299
SMG.6: 20 residues within 4Å:- Chain B: F.19, F.23, Q.26, M.50, Y.55, S.135, K.161, K.163, D.189, N.191, E.214, D.239, K.263, G.291, M.292, I.293, E.294, D.316, F.323
- Ligands: MG.2
20 PLIP interactions:20 interactions with chain B- Hydrophobic interactions: B:I.293, B:D.316, B:F.323
- Hydrogen bonds: B:S.135, B:K.161, B:K.163, B:N.191, B:K.263, B:G.291, B:G.291, B:I.293
- Water bridges: B:N.191, B:N.261, B:G.291, B:M.292, B:R.299, B:R.299
- Salt bridges: B:K.161, B:K.163, B:K.263
SMG.7: 19 residues within 4Å:- Chain C: F.19, Q.26, M.50, Y.55, S.135, K.161, K.163, D.189, N.191, E.214, D.239, K.263, G.291, M.292, I.293, E.294, D.316, F.323
- Ligands: MG.3
22 PLIP interactions:22 interactions with chain C- Hydrophobic interactions: C:D.316, C:F.323
- Hydrogen bonds: C:S.135, C:K.161, C:K.163, C:N.191, C:N.191, C:G.291, C:G.291, C:I.293, C:E.294, C:D.316
- Water bridges: C:E.214, C:N.261, C:G.291, C:R.299, C:R.299, C:S.318
- Salt bridges: C:K.161, C:K.163, C:K.263, C:R.299
SMG.8: 18 residues within 4Å:- Chain D: F.19, F.23, Q.26, M.50, S.135, K.161, K.163, D.189, N.191, E.214, D.239, K.263, G.291, M.292, I.293, D.316, F.323
- Ligands: MG.4
15 PLIP interactions:15 interactions with chain D- Hydrophobic interactions: D:I.293, D:F.323
- Hydrogen bonds: D:S.135, D:K.161, D:N.191, D:K.263, D:G.291, D:G.291, D:I.293
- Water bridges: D:N.191, D:G.291
- Salt bridges: D:K.161, D:K.163, D:K.263, D:R.299
SMG.13: 19 residues within 4Å:- Chain E: F.19, T.21, F.23, M.50, Y.55, S.135, K.161, K.163, D.189, N.191, E.214, D.239, K.263, G.291, M.292, I.293, D.316, F.323
- Ligands: MG.9
20 PLIP interactions:20 interactions with chain E- Hydrophobic interactions: E:I.293, E:F.323
- Hydrogen bonds: E:S.135, E:K.161, E:K.163, E:N.191, E:N.261, E:K.263, E:G.291, E:G.291, E:I.293
- Water bridges: E:N.191, E:G.291, E:E.294, E:R.299, E:R.299
- Salt bridges: E:K.161, E:K.163, E:K.263, E:R.299
SMG.14: 20 residues within 4Å:- Chain F: F.19, F.23, Q.26, M.50, Y.55, S.135, K.161, K.163, D.189, N.191, E.214, D.239, K.263, G.291, M.292, I.293, E.294, D.316, F.323
- Ligands: MG.10
21 PLIP interactions:21 interactions with chain F- Hydrophobic interactions: F:I.293, F:D.316, F:F.323
- Hydrogen bonds: F:S.135, F:K.161, F:K.163, F:N.191, F:D.239, F:K.263, F:G.291, F:G.291, F:I.293
- Water bridges: F:N.191, F:G.291, F:M.292, F:R.299, F:R.299, F:D.316
- Salt bridges: F:K.161, F:K.163, F:K.263
SMG.15: 19 residues within 4Å:- Chain G: F.19, Q.26, M.50, Y.55, S.135, K.161, K.163, D.189, N.191, E.214, D.239, K.263, G.291, M.292, I.293, E.294, D.316, F.323
- Ligands: MG.11
19 PLIP interactions:19 interactions with chain G- Hydrophobic interactions: G:D.316, G:F.323
- Hydrogen bonds: G:S.135, G:K.161, G:K.163, G:N.191, G:N.191, G:G.291, G:G.291, G:I.293
- Water bridges: G:N.261, G:G.291, G:R.299, G:R.299, G:S.318
- Salt bridges: G:K.161, G:K.163, G:K.263, G:R.299
SMG.16: 18 residues within 4Å:- Chain H: F.19, F.23, Q.26, M.50, S.135, K.161, K.163, D.189, N.191, E.214, D.239, K.263, G.291, M.292, I.293, D.316, F.323
- Ligands: MG.12
17 PLIP interactions:17 interactions with chain H- Hydrophobic interactions: H:I.293, H:F.323
- Hydrogen bonds: H:S.135, H:K.161, H:N.191, H:N.191, H:D.239, H:K.263, H:G.291, H:G.291, H:I.293
- Water bridges: H:N.191, H:G.291
- Salt bridges: H:K.161, H:K.163, H:K.263, H:R.299
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Thoden, J.B. et al., Evolution of Enzymatic Activity in the Enolase Superfamily: Structural Studies of the Promiscuous o-Succinylbenzoate Synthase from Amycolatopsis. Biochemistry (2004)
- Release Date
- 2004-06-01
- Peptides
- N-acylamino acid racemase: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
AF
BG
CH
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-octamer
- Ligands
- 8 x MG: MAGNESIUM ION(Non-covalent)
- 8 x SMG: N-SUCCINYL METHIONINE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Thoden, J.B. et al., Evolution of Enzymatic Activity in the Enolase Superfamily: Structural Studies of the Promiscuous o-Succinylbenzoate Synthase from Amycolatopsis. Biochemistry (2004)
- Release Date
- 2004-06-01
- Peptides
- N-acylamino acid racemase: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
AF
BG
CH
D