SMTL ID : 1snk.1

Cathepsin K complexed with carbamate derivatized norleucine aldehyde

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: K.118, K.121, N.198 4 PLIP interactions: 4 interactions with chain A Water bridges: A:E.117, A:N.198 Salt bridges: A:K.118, A:K.121 SO4.2: 4 residues within 4Å: Chain A: N.17, G.184, E.185, N.186 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.17, A:E.185, A:N.186, A:N.186 SO4.3: 2 residues within 4Å: Chain A: R.110, K.213 3 PLIP interactions: 3 interactions with chain A Water bridges: A:Y.109 Salt bridges: A:R.110, A:K.213

1 x MYE: N2-({[(4-BROMOPHENYL)METHYL]OXY}CARBONYL)-N1-[(1S)-1-FORMYLPENTYL]-L-LEUCINAMIDE(Covalent)

MYE.4: 15 residues within 4Å: Chain A: Q.18, G.22, C.24, W.25, E.58, N.59, D.60, G.63, G.64, G.65, Y.66, A.133, L.159, N.160, H.161 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:D.60, A:Y.66, A:Y.66, A:Y.66, A:A.133 Hydrogen bonds: A:Q.18, A:C.24, A:G.65, A:G.65, A:N.160, A:H.161

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Boros, E.E. et al., Exploration of the P(2)-P(3) SAR of aldehyde cathepsin K inhibitors. Bioorg.Med.Chem.Lett. (2004)

Release Date

2004-06-22

Peptides

Cathepsin K: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cathepsin K