SMTL ID : 1soi.1

CRYSTAL STRUCTURE OF NUDIX HYDROLASE DR1025 IN COMPLEX WITH SM+3

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

6 x SM: SAMARIUM (III) ION(Non-covalent)

SM.1: 2 residues within 4Å: Chain A: E.65, E.68 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.65, A:E.65, A:E.68, H2O.2, H2O.3 SM.2: 2 residues within 4Å: Chain A: D.147, R.150 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.147, H2O.2, H2O.3, H2O.4 SM.3: 3 residues within 4Å: Chain A: E.12, R.86, G.90 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.12, A:G.90, H2O.3 SM.4: 2 residues within 4Å: Chain B: E.65, E.68 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.65, B:E.65, B:E.68, H2O.6, H2O.7 SM.5: 2 residues within 4Å: Chain B: D.147, R.150 4 PLIP interactions: 1 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:D.147, H2O.6, H2O.7, H2O.8 SM.6: 3 residues within 4Å: Chain B: E.12, R.86, G.90 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.12, B:G.90, H2O.6

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ranatunga, W. et al., Structural Studies of the Nudix Hydrolase DR1025 From Deinococcus radiodurans and its Ligand Complexes. J.Mol.Biol. (2004)

Release Date

2004-05-11

Peptides

MutT/nudix family protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

MutT/nudix family protein

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