SMTL ID : 1ssx.1

0.83A resolution crystal structure of alpha-lytic protease at pH 8

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 0.83 Å

Oligo State

monomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 1 residues within 4Å: Chain A: R.78 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.78, A:R.78, A:R.78 Salt bridges: A:R.78 SO4.2: 3 residues within 4Å: Chain A: R.183, P.186, S.189 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.183, A:R.183, A:S.189 Salt bridges: A:R.183 SO4.3: 6 residues within 4Å: Chain A: H.36, R.140, G.141, D.142, S.143 Ligands: GOL.5 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.141, A:S.143, A:S.143 Water bridges: A:D.142 Salt bridges: A:H.36 SO4.4: 3 residues within 4Å: Chain A: G.126, A.127, R.129 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.127 Water bridges: A:R.129 Salt bridges: A:R.129

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 9 residues within 4Å: Chain A: H.36, F.59, Y.123, A.124, E.125, S.143, S.159, G.160 Ligands: SO4.3 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:H.36, A:E.125 Water bridges: A:A.124, A:S.143, A:G.161 GOL.6: 3 residues within 4Å: Chain A: F.85, V.86, T.87 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.87, A:T.87 Water bridges: A:T.87, A:T.87, A:S.150

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fuhrmann, C.N. et al., The 0.83A Resolution Crystal Structure of alpha-Lytic Protease Reveals the Detailed Structure of the Active Site and Identifies a Source of Conformational Strain. J.Mol.Biol. (2004)

Release Date

2004-05-04

Peptides

Alpha-lytic protease: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Alpha-lytic protease

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