SMTL ID : 1svw.1 (1 other biounit)

Crystal Structure of YsxC complexed with GMPPNP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 6 residues within 4Å: Chain A: K.36, S.37, T.59, D.75, V.76 Ligands: GTP.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:S.37, A:D.75, A:V.76

1 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)

GTP.2: 24 residues within 4Å: Chain A: R.31, S.32, N.33, V.34, G.35, K.36, S.37, S.38, T.52, S.53, S.54, P.56, G.57, K.58, T.59, G.78, T.142, K.143, D.145, K.146, S.175, S.176, E.177 Ligands: MG.1 22 PLIP interactions: 22 interactions with chain A Hydrogen bonds: A:N.33, A:G.35, A:K.36, A:S.37, A:S.37, A:S.37, A:S.38, A:S.38, A:S.53, A:S.54, A:G.57, A:T.59, A:T.59, A:G.78, A:K.143, A:K.146, A:S.176, A:E.177 Salt bridges: A:K.36, A:K.36, A:D.145 pi-Cation interactions: A:K.143

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ruzheinikov, S.N. et al., Analysis of the Open and Closed Conformations of the GTP-binding Protein YsxC from Bacillus subtilis. J.Mol.Biol. (2004)

Release Date

2004-05-25

Peptides

GTP-binding protein YsxC: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GTP-binding protein YsxC

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