SMTL ID : 1szp.2 (2 other biounits)

A Crystal Structure of the Rad51 Filament

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.25 Å

Oligo State

homo-hexamer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: E.107, R.109, T.110, G.111, K.112, S.113 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.109, A:T.110, A:G.111, A:K.112, A:S.113 Salt bridges: A:K.112 SO4.2: 8 residues within 4Å: Chain B: E.107, F.108, R.109, T.110, G.111, K.112, S.113, Q.247 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:R.109, B:T.110, B:G.111, B:K.112, B:S.113, B:Q.247 Salt bridges: B:K.112 SO4.3: 6 residues within 4Å: Chain C: E.107, R.109, T.110, G.111, K.112, S.113 6 PLIP interactions: 6 interactions with chain C Hydrogen bonds: C:R.109, C:T.110, C:G.111, C:K.112, C:S.113 Salt bridges: C:K.112 SO4.4: 8 residues within 4Å: Chain D: E.107, F.108, R.109, T.110, G.111, K.112, S.113, Q.247 7 PLIP interactions: 7 interactions with chain D Hydrogen bonds: D:R.109, D:T.110, D:G.111, D:K.112, D:S.113, D:Q.247 Salt bridges: D:K.112 SO4.5: 6 residues within 4Å: Chain E: E.107, R.109, T.110, G.111, K.112, S.113 6 PLIP interactions: 6 interactions with chain E Hydrogen bonds: E:R.109, E:T.110, E:G.111, E:K.112, E:S.113 Salt bridges: E:K.112 SO4.6: 8 residues within 4Å: Chain F: E.107, F.108, R.109, T.110, G.111, K.112, S.113, Q.247 7 PLIP interactions: 7 interactions with chain F Hydrogen bonds: F:R.109, F:T.110, F:G.111, F:K.112, F:S.113, F:Q.247 Salt bridges: F:K.112

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Conway, A.B. et al., Crystal structure of a Rad51 filament. Nat.Struct.Mol.Biol. (2004)

Release Date

2004-07-13

Peptides

DNA repair protein RAD51: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

C
B

D
C

E
B

F
C

DNA repair protein RAD51

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