SMTL ID : 1t4c.1

Formyl-CoA Transferase in complex with Oxalyl-CoA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.61 Å

Oligo State

homo-dimer

Ligands

2 x COA: COENZYME A(Non-covalent)

COA.1: 22 residues within 4Å: Chain A: H.14, V.15, Q.16, A.17, R.37, M.43, L.71, D.72, M.73, K.74, N.95, F.96, G.97, A.100, R.103, M.104, V.123, K.124, V.137, Y.138, D.168, M.199 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:H.14, A:R.37, A:L.71, A:M.73, A:N.95, A:N.95, A:F.96, A:V.137 Water bridges: A:R.37, A:R.37 Salt bridges: A:H.14, A:R.103 pi-Cation interactions: A:R.37 COA.2: 23 residues within 4Å: Chain B: H.14, V.15, Q.16, A.17, R.37, L.71, D.72, M.73, K.74, N.95, F.96, G.97, A.100, R.103, M.104, V.123, K.124, G.125, V.137, Y.138, D.168, M.199 Ligands: OXD.3 15 PLIP interactions: 15 interactions with chain B Hydrogen bonds: B:H.14, B:R.37, B:R.37, B:L.71, B:M.73, B:N.95, B:N.95, B:F.96, B:A.100, B:V.137 Salt bridges: B:H.14, B:H.14, B:K.74, B:R.103 pi-Cation interactions: B:R.37

1 x OXD: OXALIC ACID(Covalent)

OXD.3: 9 residues within 4Å: Chain A: G.259, G.260 Chain B: V.15, Q.16, A.17, Y.138, E.139, D.168 Ligands: COA.2 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:Q.16, B:A.17, B:E.139, B:D.168

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jonsson, S. et al., Kinetic and mechanistic characterization of the formyl-CoA transferase from Oxalobacter formigenes. J.Biol.Chem. (2004)

Release Date

2004-08-03

Peptides

Formyl-CoA:oxalate CoA-transferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Formyl-CoA:oxalate CoA-transferase