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SMTL ID : 1t5b.1
Structural genomics, A protein from Salmonella typhimurium similar to E. coli acyl carrier protein phosphodiesterase
Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.40 Å
Oligo State
homo-dimer
Ligands
2 x
FMN
:
FLAVIN MONONUCLEOTIDE
(Non-covalent)
FMN.1:
18 residues within 4Å:
Chain A:
S.10
,
L.12
,
S.16
,
Q.17
,
S.18
,
P.95
,
M.96
,
Y.97
,
N.98
,
F.99
,
S.140
,
R.141
,
G.142
,
G.143
,
H.145
,
I.177
Chain B:
L.51
,
R.60
16
PLIP interactions
:
15 interactions with chain A
,
1 interactions with chain B
Hydrophobic interactions:
A:Y.97
,
B:L.51
Hydrogen bonds:
A:S.10
,
A:Q.17
,
A:S.18
,
A:M.96
,
A:M.96
,
A:Y.97
,
A:N.98
,
A:F.99
,
A:S.140
,
A:S.140
,
A:G.142
,
A:G.143
,
A:H.145
pi-Stacking:
A:Y.97
FMN.2:
18 residues within 4Å:
Chain A:
L.51
,
V.56
Chain B:
S.10
,
L.12
,
S.16
,
Q.17
,
S.18
,
P.95
,
M.96
,
Y.97
,
N.98
,
F.99
,
S.140
,
R.141
,
G.142
,
G.143
,
H.145
,
I.177
18
PLIP interactions
:
2 interactions with chain A
,
16 interactions with chain B
Hydrophobic interactions:
A:L.51
,
A:V.56
,
B:Y.97
Hydrogen bonds:
B:S.10
,
B:Q.17
,
B:S.18
,
B:M.96
,
B:M.96
,
B:Y.97
,
B:Y.97
,
B:N.98
,
B:F.99
,
B:S.140
,
B:S.140
,
B:G.142
,
B:G.143
,
B:H.145
pi-Stacking:
B:Y.97
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Zhang, R. et al., 1.4 A crystal structure of a protein from Salmonella typhimurium similar to E. coli acyl carrier protein phosphodiesterase. To be Published
Release Date
2004-08-03
Peptides
Acyl carrier protein phosphodiesterase:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
Export Alignment
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Secondary Structure
None
DSSP
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Fade Mismatches
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2° Structure
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Acyl carrier protein phosphodiesterase
Cartoon
Cartoon
Tube
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Lines
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Licorice
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Rope
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Transparent
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