SMTL ID : 1t69.1

Crystal Structure of human HDAC8 complexed with SAHA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.91 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: D.178, H.180, D.267, G.304 Ligands: SHH.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.178, A:D.178, A:H.180, A:D.267

1 x SHH: OCTANEDIOIC ACID HYDROXYAMIDE PHENYLAMIDE(Non-covalent)

SHH.2: 13 residues within 4Å: Chain A: Y.100, D.101, H.142, H.143, G.151, F.152, D.178, H.180, F.208, D.267, M.274, Y.306 Ligands: ZN.1 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:Y.100, A:F.152, A:F.152, A:F.208, A:F.208 Hydrogen bonds: A:H.180

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Somoza, J.R. et al., Structural Snapshots of Human HDAC8 Provide Insights into the Class I Histone Deacetylases. Structure (2004)

Release Date

2004-07-27

Peptides

Histone deacetylase 8: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Histone deacetylase 8

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