SMTL ID : 1t89.1

CRYSTAL STRUCTURE OF A HUMAN TYPE III FC GAMMA RECEPTOR IN COMPLEX WITH AN FC FRAGMENT OF IGG1 (HEXAGONAL)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.50 Å

Oligo State

hetero-2-1-mer

Ligands

1 x NAG- NAG- BMA- MAN- NDG- GAL- BMA- FUL: beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[beta-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-NDG-GAL-BMA-FUL.1: 12 residues within 4Å: Chain A: F.18, F.20, P.21, P.22, K.23, E.35, T.37, V.41, D.42, Y.73, N.74, R.78 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.35, A:E.35, A:T.37, A:T.37, A:R.78, A:K.23, A:K.23, A:R.78

1 x NAG- NDG- BMA- MAN- NAG- MAN- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NDG-BMA-MAN-NAG-MAN-NAG-FUC.2: 9 residues within 4Å: Chain B: F.18, F.20, T.37, V.41, D.42, N.74, T.76, R.78, K.111 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:T.37 Hydrophobic interactions: B:V.41

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Radaev, S. et al., The structure of a human type III Fcgamma receptor in complex with Fc. J.Biol.Chem. (2001)

Release Date

2004-09-14

Peptides

recombinant IgG1 heavy chain: AB
Low affinity immunoglobulin gamma Fc region receptor III-B: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

recombinant IgG1 heavy chain

Low affinity immunoglobulin gamma Fc region receptor III-B

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