SMTL ID : 1t9m.1

X-ray crystal structure of phzG from pseudomonas aeruginosa

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 1 residues within 4Å: Chain A: R.39 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.39 SO4.2: 5 residues within 4Å: Chain A: R.118, D.121, R.170, P.172, G.173 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.173 Water bridges: A:R.118, A:R.118 Salt bridges: A:R.118, A:R.170 SO4.3: 5 residues within 4Å: Chain B: R.118, D.121, R.170, P.172, G.173 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:G.173 Water bridges: B:R.118 Salt bridges: B:R.118, B:R.170 SO4.4: 3 residues within 4Å: Chain B: P.95, W.96, R.115 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.115

2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)

FMN.5: 17 residues within 4Å: Chain A: E.47, R.65, I.66, V.67, V.68, A.80, T.81, S.85, Q.86, K.87, Q.144, S.145 Chain B: L.11, Y.102, Q.109, W.187, R.197 29 PLIP interactions: 14 interactions with chain B, 15 interactions with chain A Hydrophobic interactions: B:L.11, B:Y.102, B:Y.102, B:W.187, B:W.187, A:I.66, A:V.68 Hydrogen bonds: B:Q.109, B:Q.109, A:I.66, A:I.66, A:V.68, A:A.80, A:Q.86, A:K.87, A:K.87, A:Q.144, A:Q.144, A:S.145 Water bridges: B:R.197, B:R.197, B:R.197, B:R.197, B:R.197, B:R.197, A:R.65 Salt bridges: B:R.197, A:R.65, A:K.87 FMN.6: 16 residues within 4Å: Chain A: Y.102, Q.109, W.187, R.197 Chain B: E.47, R.65, I.66, V.67, V.68, A.80, T.81, S.85, Q.86, K.87, Q.144, S.145 24 PLIP interactions: 8 interactions with chain A, 16 interactions with chain B Hydrophobic interactions: A:W.187, A:W.187, B:I.66, B:V.68 Hydrogen bonds: A:Q.109, A:W.187, B:I.66, B:I.66, B:V.68, B:A.80, B:Q.86, B:K.87, B:K.87, B:Q.144, B:Q.144, B:S.145 Water bridges: A:R.197, A:R.197, A:R.197, B:Q.86, B:Q.86 Salt bridges: A:R.197, B:R.65, B:K.87

2 x ACY: ACETIC ACID(Non-functional Binders)

ACY.7: 4 residues within 4Å: Chain A: Y.102, R.104 Chain B: Y.102, R.104 5 PLIP interactions: 2 interactions with chain A, 3 interactions with chain B Water bridges: A:Y.102, B:Y.102, B:Y.102 Salt bridges: A:R.104, B:R.104 ACY.8: 5 residues within 4Å: Chain A: R.46, E.105 Chain B: R.46, R.104, E.105 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Water bridges: A:R.46, B:R.104 Salt bridges: A:R.46 Hydrogen bonds: B:E.105

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Parsons, J.F. et al., Structure of the phenazine biosynthesis enzyme PhzG. Acta Crystallogr.,Sect.D (2004)

Release Date

2004-11-02

Peptides

probable pyridoxamine 5'-phosphate oxidase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

probable pyridoxamine 5'-phosphate oxidase