SMTL ID : 1ta1.1

H141C mutant of rat liver arginase I

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-trimer

Ligands

6 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 6 residues within 4Å: Chain A: D.119, H.121, D.227, D.229 Ligands: MN.2, GOL.4 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.119, A:H.121, A:D.227, A:D.229, A:D.229 MN.2: 6 residues within 4Å: Chain A: H.96, D.119, D.123, D.227 Ligands: MN.1, GOL.4 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.96, A:D.119, A:D.123, A:D.227 MN.5: 6 residues within 4Å: Chain B: D.119, H.121, D.227, D.229 Ligands: MN.6, GOL.8 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:D.119, B:H.121, B:D.227, B:D.229, B:D.229 MN.6: 6 residues within 4Å: Chain B: H.96, D.119, D.123, D.227 Ligands: MN.5, GOL.8 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.96, B:D.119, B:D.123, B:D.227 MN.9: 6 residues within 4Å: Chain C: D.119, H.121, D.227, D.229 Ligands: MN.10, GOL.12 5 PLIP interactions: 5 interactions with chain C Metal complexes: C:D.119, C:H.121, C:D.227, C:D.229, C:D.229 MN.10: 6 residues within 4Å: Chain C: H.96, D.119, D.123, D.227 Ligands: MN.9, GOL.12 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:H.96, C:D.119, C:D.123, C:D.227

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 6 residues within 4Å: Chain A: N.125, T.130, S.132, D.178, E.181 Ligands: GOL.4 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.181 Water bridges: A:D.123, A:N.125 GOL.4: 12 residues within 4Å: Chain A: H.96, D.119, H.121, D.123, C.136, D.227, D.229, T.241, E.272 Ligands: MN.1, MN.2, GOL.3 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.272, A:E.272 GOL.7: 6 residues within 4Å: Chain B: N.125, T.130, S.132, D.178, E.181 Ligands: GOL.8 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:E.181 Water bridges: B:D.123, B:D.123, B:N.125 GOL.8: 11 residues within 4Å: Chain B: H.96, D.119, H.121, D.123, C.136, D.227, T.241, E.272 Ligands: MN.5, MN.6, GOL.7 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:E.272, B:E.272 GOL.11: 5 residues within 4Å: Chain C: N.125, S.132, D.178, E.181 Ligands: GOL.12 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:E.181 Water bridges: C:D.123, C:N.125 GOL.12: 11 residues within 4Å: Chain C: H.96, D.119, H.121, D.123, C.136, D.227, T.241, E.272 Ligands: MN.9, MN.10, GOL.11 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:E.272, C:E.272

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Colleluori, D.M. et al., Probing the role of the hyper-reactive histidine residue of arginase. Arch.Biochem.Biophys. (2005)

Release Date

2005-08-16

Peptides

Arginase 1: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Arginase 1