- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.63 Å
- Oligo State
- monomer
- Ligands
- 1 x ZN: ZINC ION(Non-covalent)
- 1 x MG: MAGNESIUM ION(Non-covalent)
- 1 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)
- 13 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.4: 4 residues within 4Å:- Chain A: E.285, Y.325, T.328
- Ligands: EDO.5
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:E.285
EDO.5: 6 residues within 4Å:- Chain A: R.249, T.252, D.253, V.284, Y.325
- Ligands: EDO.4
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:R.249
EDO.6: 5 residues within 4Å:- Chain A: S.127, F.259, S.274, P.275, M.276
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:S.127, A:S.127
- Water bridges: A:S.127, A:Q.262
EDO.7: 3 residues within 4Å:- Chain A: Q.177, S.178, K.181
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:S.178
EDO.8: 5 residues within 4Å:- Chain A: F.157, L.160, F.168, R.176, R.180
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:R.176
- Water bridges: A:R.176, A:R.180
EDO.9: 2 residues within 4Å:- Chain A: E.137, M.141
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:E.137
EDO.10: 3 residues within 4Å:- Chain A: K.181, I.184, D.185
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:D.185
- Water bridges: A:K.181
EDO.11: 7 residues within 4Å:- Chain A: N.34, E.69, D.70, Y.72, A.74, N.81
- Ligands: EDO.12
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:D.70, A:N.81
- Water bridges: A:N.81
EDO.12: 6 residues within 4Å:- Chain A: N.34, A.74, N.80, N.81, I.82
- Ligands: EDO.11
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:N.34, A:N.81
- Water bridges: A:N.81, A:R.254, A:R.254
EDO.13: 6 residues within 4Å:- Chain A: S.127, N.128, E.149, D.191, M.192
- Ligands: EDO.16
9 PLIP interactions:9 interactions with chain A- Hydrogen bonds: A:N.128, A:N.128, A:E.149, A:D.191, A:M.192
- Water bridges: A:S.127, A:Q.129, A:E.149, A:S.193
EDO.14: 4 residues within 4Å:- Chain A: D.185, I.226, Q.230
- Ligands: EDO.15
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Q.230
- Water bridges: A:D.185
EDO.15: 6 residues within 4Å:- Chain A: D.185, L.188, A.189, K.194, Q.230
- Ligands: EDO.14
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:D.185, A:Q.230
EDO.16: 9 residues within 4Å:- Chain A: H.79, H.123, G.125, V.126, S.127, E.258, Q.262
- Ligands: AMP.3, EDO.13
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:G.125
- Water bridges: A:S.127
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zhang, K.Y.J. et al., A Glutamine Switch Mechanism for Nucleotide Selectivity by Phosphodiesterases. Mol.Cell (2004)
- Release Date
- 2004-08-03
- Peptides
- cAMP-specific 3',5'-cyclic phosphodiesterase 4D: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.63 Å
- Oligo State
- monomer
- Ligands
- 1 x ZN: ZINC ION(Non-covalent)
- 1 x MG: MAGNESIUM ION(Non-covalent)
- 1 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)
- 13 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zhang, K.Y.J. et al., A Glutamine Switch Mechanism for Nucleotide Selectivity by Phosphodiesterases. Mol.Cell (2004)
- Release Date
- 2004-08-03
- Peptides
- cAMP-specific 3',5'-cyclic phosphodiesterase 4D: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
B