SMTL ID : 1tbj.1

H141A mutant of rat liver arginase I

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-trimer

Ligands

6 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 5 residues within 4Å: Chain A: D.119, H.121, D.227, D.229 Ligands: MN.2 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.119, A:H.121, A:D.227, A:D.229, A:D.229 MN.2: 5 residues within 4Å: Chain A: H.96, D.119, D.123, D.227 Ligands: MN.1 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.96, A:D.119, A:D.123, A:D.227, H2O.1 MN.4: 5 residues within 4Å: Chain B: D.119, H.121, D.227, D.229 Ligands: MN.5 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:D.119, B:H.121, B:D.227, B:D.229, B:D.229 MN.5: 5 residues within 4Å: Chain B: H.96, D.119, D.123, D.227 Ligands: MN.4 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.96, B:D.119, B:D.123, B:D.227, H2O.1 MN.7: 5 residues within 4Å: Chain C: D.119, H.121, D.227, D.229 Ligands: MN.8 5 PLIP interactions: 5 interactions with chain C Metal complexes: C:D.119, C:H.121, C:D.227, C:D.229, C:D.229 MN.8: 5 residues within 4Å: Chain C: H.96, D.119, D.123, D.227 Ligands: MN.7 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:H.96, C:D.119, C:D.123, C:D.227, H2O.1

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 6 residues within 4Å: Chain A: H.121, D.123, N.125, S.132, D.178, E.181 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.123, A:N.125, A:D.178 Water bridges: A:D.123, A:D.123 GOL.6: 6 residues within 4Å: Chain B: H.121, D.123, N.125, S.132, D.178, E.181 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:D.123, B:N.125, B:D.178, B:D.178 Water bridges: B:D.123, B:D.123 GOL.9: 5 residues within 4Å: Chain C: D.123, N.125, S.132, G.137, D.178 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:D.123, C:N.125, C:D.178 Water bridges: C:D.123

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Colleluori, D.M. et al., Probing the role of the hyper-reactive histidine residue of arginase. Arch.Biochem.Biophys. (2005)

Release Date

2005-08-16

Peptides

Arginase 1: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Arginase 1