SMTL ID : 1tcr.1

MURINE T-CELL ANTIGEN RECEPTOR 2C CLONE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG- NAG- BMA- FUC: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-FUC.1: 5 residues within 4Å: Chain A: N.178 Chain B: R.144, E.175, S.176, S.179 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:E.175 Hydrogen bonds: B:R.144, B:S.176, B:S.176, B:S.179, B:S.179

1 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-FUC.2: 2 residues within 4Å: Chain A: S.67, N.70 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.3: 4 residues within 4Å: Chain B: W.156, Q.203, Q.205, N.226 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:W.156

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.4: 1 residues within 4Å: Chain A: N.192 No protein-ligand interaction detected (PLIP)

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.5: 4 residues within 4Å: Chain B: P.8, R.9, N.10, H.207 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:R.9, B:N.10, B:N.10 Salt bridges: B:H.207 SO4.6: 3 residues within 4Å: Chain B: G.159, H.199, R.201 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:G.159 Salt bridges: B:H.199, B:R.201 SO4.7: 3 residues within 4Å: Chain B: V.162, H.163, S.164 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:H.163, B:S.164 Salt bridges: A:K.164

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Garcia, K.C. et al., An alphabeta T cell receptor structure at 2.5 A and its orientation in the TCR-MHC complex. Science (1996)

Release Date

1997-03-12

Peptides

ALPHA, BETA T-CELL RECEPTOR (VB8.2DB2JB2.4CB2\;VA3JA58CA): A
ALPHA, BETA T-CELL RECEPTOR (VB8.2DB2JB2.4CB2\;VA3JA58CA): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

ALPHA, BETA T-CELL RECEPTOR (VB8.2DB2JB2.4CB2\;VA3JA58CA)

ALPHA, BETA T-CELL RECEPTOR (VB8.2DB2JB2.4CB2\;VA3JA58CA)

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