SMTL ID : 1tcw.1

SIV PROTEASE COMPLEXED WITH INHIBITOR SB203386

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x IM1: (2R,4S,5S,1'S)-2-PHENYLMETHYL-4-HYDROXY-5-(TERT-BUTOXYCARBONYL)AMINO-6-PHENYL HEXANOYL-N-(1'-IMIDAZO-2-YL)-2'-METHYLPROPANAMIDE(Non-covalent)

IM1.1: 15 residues within 4Å: Chain A: G.27, A.28, D.29, D.30, I.32, I.46, V.47, G.48, G.49, F.53, I.84 Chain B: R.8, L.23, I.50 Ligands: IM1.2 15 PLIP interactions: 13 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:A.28, A:D.30, A:I.32, A:V.47, A:F.53, A:I.84, B:L.23 Hydrogen bonds: A:G.27, A:D.29, A:D.29, A:D.29, A:G.48, A:G.48 Water bridges: A:I.50 pi-Cation interactions: B:R.8 IM1.2: 12 residues within 4Å: Chain A: R.8, I.50, P.81 Chain B: G.27, A.28, D.29, D.30, I.32, V.47, G.48, G.49 Ligands: IM1.1 12 PLIP interactions: 3 interactions with chain A, 9 interactions with chain B Hydrophobic interactions: A:I.50, A:P.81, B:A.28, B:D.30, B:I.32 Water bridges: A:R.8, B:I.50 Hydrogen bonds: B:D.29, B:D.29, B:G.48, B:G.48, B:G.48

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hoog, S.S. et al., Human immunodeficiency virus protease ligand specificity conferred by residues outside of the active site cavity. Biochemistry (1996)

Release Date

1996-12-07

Peptides

SIV PROTEASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

SIV PROTEASE

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