SMTL ID : 1tdz.1

Crystal Structure Complex Between the Lactococcus Lactis FPG (Mutm) and a FAPY-dG Containing DNA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain C: C.246, C.249, C.266, C.269 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.246, C:C.249, C:C.266, C:C.269

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 9 residues within 4Å: Chain A: T.9, T.10 Chain C: Y.59, H.73, R.75, T.114, E.116, Y.126, K.130 6 PLIP interactions: 6 interactions with chain C Hydrogen bonds: C:R.75, C:T.114, C:E.116, C:K.130, C:K.130 Water bridges: C:Y.59

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Coste, F. et al., Structural basis for the recognition of the FapydG lesion (2,6-diamino-4-hydroxy-5-formamidopyrimidine) by formamidopyrimidine-DNA glycosylase. J.Biol.Chem. (2004)

Release Date

2004-09-07

Peptides

formamidopyrimidine-DNA glycosylase: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
A

formamidopyrimidine-DNA glycosylase