SMTL ID : 1te2.2 (1 other biounit)

Putative Phosphatase Ynic from Escherichia coli K12

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.76 Å

Oligo State

homo-dimer

Ligands

2 x PGA: SUGAR (2-PHOSPHOGLYCOLIC ACID)(Non-covalent)

PGA.1: 9 residues within 4Å: Chain A: D.15, M.16, D.17, G.53, S.117, A.118, K.150, S.176 Ligands: CA.4 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:D.17, A:S.117, A:A.118, A:S.176 Water bridges: A:G.53, A:G.53 Salt bridges: A:K.150 PGA.5: 9 residues within 4Å: Chain B: D.15, M.16, D.17, G.53, S.117, A.118, K.150, S.176 Ligands: CA.6 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:D.17, B:D.17, B:A.118, B:S.119, B:S.176 Water bridges: B:E.24 Salt bridges: B:K.150

4 x CA: CALCIUM ION(Non-covalent)

CA.2: 4 residues within 4Å: Chain A: D.132, D.135 Chain B: D.132, D.135 5 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: B:D.132, B:D.135, A:D.135, H2O.2, H2O.14 CA.3: 1 residues within 4Å: Chain A: E.108 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.108, H2O.5, H2O.9 CA.4: 4 residues within 4Å: Chain A: D.15, D.17, D.175 Ligands: PGA.1 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.15, A:D.17, A:D.175, H2O.1, H2O.2 CA.6: 4 residues within 4Å: Chain B: D.15, D.17, D.175 Ligands: PGA.5 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.15, B:D.17, B:D.175, H2O.13, H2O.13

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, Y. et al., Crystal Structure of Putative Phosphatase Ynic from Escherichia coli K12. To be Published

Release Date

2004-08-03

Peptides

2-deoxyglucose-6-P phosphatase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

2-deoxyglucose-6-P phosphatase

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