SMTL ID : 1tg8.1

The structure of Dengue virus E glycoprotein

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.61 Å

Oligo State

homo-dimer

Ligands

4 x NDG: 2-acetamido-2-deoxy-alpha-D-glucopyranose(Non-covalent)

NDG.1: 1 residues within 4Å: Chain A: N.67 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.67 NDG.2: 4 residues within 4Å: Chain A: N.153, T.155, H.158 Chain B: G.102 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.153 NDG.3: 1 residues within 4Å: Chain B: N.67 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.67 NDG.4: 4 residues within 4Å: Chain A: G.102 Chain B: N.153, T.155, H.158 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.153, B:T.155

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Y. et al., Conformational changes of the flavivirus e glycoprotein. Structure (2004)

Release Date

2004-09-28

Peptides

envelope glycoprotein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

envelope glycoprotein