SMTL ID : 1thc.1

CRYSTAL STRUCTURE DETERMINATION AT 2.3A OF HUMAN TRANSTHYRETIN-3',5'-DIBROMO-2',4,4',6-TETRA-HYDROXYAURONE COMPLEX

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-tetramer

Ligands

8 x FL9: 3',5'-DIBROMO-2',4,4',6'-TETRAHYDROXY AURONE(Non-covalent)

FL9.1: 18 residues within 4Å: Chain A: K.15, L.17, A.108, L.110, S.117, T.118, T.119 Chain C: K.15, L.17, T.106, A.108, L.110, S.117, T.119, V.121 Ligands: FL9.2, FL9.5, FL9.6 7 PLIP interactions: 4 interactions with chain C, 3 interactions with chain A Hydrophobic interactions: C:K.15, C:L.17, A:L.17 Hydrogen bonds: C:K.15, C:S.117, A:K.15, A:S.117 FL9.2: 8 residues within 4Å: Chain A: K.15, L.17, A.108 Chain C: K.15, L.17 Ligands: FL9.1, FL9.5, FL9.6 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain C Hydrophobic interactions: A:K.15 Hydrogen bonds: A:K.15, C:K.15 FL9.3: 19 residues within 4Å: Chain B: K.15, L.17, A.108, L.110, S.117, T.118, T.119 Chain D: K.15, L.17, T.106, A.108, L.110, S.117, T.118, T.119, V.121 Ligands: FL9.4, FL9.7, FL9.8 12 PLIP interactions: 8 interactions with chain D, 4 interactions with chain B Hydrophobic interactions: D:L.17, D:T.106, D:A.108, D:L.110, D:V.121, B:L.17 Hydrogen bonds: D:K.15, D:K.15, D:S.117, B:K.15, B:S.117, B:S.117 FL9.4: 9 residues within 4Å: Chain B: K.15, L.17, A.108 Chain D: K.15, L.17, A.108 Ligands: FL9.3, FL9.7, FL9.8 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain D Hydrogen bonds: B:K.15, D:K.15 FL9.5: 18 residues within 4Å: Chain A: K.15, L.17, T.106, A.108, L.110, S.117, T.119, V.121 Chain C: K.15, L.17, A.108, L.110, S.117, T.118, T.119 Ligands: FL9.1, FL9.2, FL9.6 7 PLIP interactions: 3 interactions with chain C, 4 interactions with chain A Hydrophobic interactions: C:L.17, A:K.15, A:L.17 Hydrogen bonds: C:K.15, C:S.117, A:K.15, A:S.117 FL9.6: 8 residues within 4Å: Chain A: K.15, L.17 Chain C: K.15, L.17, A.108 Ligands: FL9.1, FL9.2, FL9.5 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain C Hydrogen bonds: A:K.15, C:K.15 Hydrophobic interactions: C:K.15 FL9.7: 19 residues within 4Å: Chain B: K.15, L.17, T.106, A.108, L.110, S.117, T.118, T.119, V.121 Chain D: K.15, L.17, A.108, L.110, S.117, T.118, T.119 Ligands: FL9.3, FL9.4, FL9.8 12 PLIP interactions: 8 interactions with chain B, 4 interactions with chain D Hydrophobic interactions: B:L.17, B:T.106, B:A.108, B:L.110, B:V.121, D:L.17 Hydrogen bonds: B:K.15, B:K.15, B:S.117, D:K.15, D:S.117, D:S.117 FL9.8: 9 residues within 4Å: Chain B: K.15, L.17, A.108 Chain D: K.15, L.17, A.108 Ligands: FL9.3, FL9.4, FL9.7 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain D Hydrogen bonds: B:K.15, D:K.15

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ciszak, E. et al., Crystal structure determination at 2.3-A resolution of human transthyretin-3',5'-dibromo-2',4,4',6-tetrahydroxyaurone complex. Proc.Natl.Acad.Sci.USA (1992)

Release Date

1993-07-15

Peptides

TRANSTHYRETIN: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

TRANSTHYRETIN

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