- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-octamer
- Ligands
- 8 x MG: MAGNESIUM ION(Non-covalent)
MG.1: 5 residues within 4Å:- Chain A: K.160, D.191, E.219, D.244
- Ligands: ALA-GLU.9
4 PLIP interactions:3 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:D.191, A:E.219, A:D.244, H2O.1
MG.2: 8 residues within 4Å:- Chain B: K.160, K.162, D.191, N.193, E.219, D.244, N.266
- Ligands: ALA-GLU.10
4 PLIP interactions:3 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:D.191, B:E.219, B:D.244, H2O.184
MG.3: 7 residues within 4Å:- Chain C: K.160, D.191, N.193, E.219, D.244, K.268
- Ligands: ALA-GLU.11
4 PLIP interactions:3 interactions with chain C, 1 Ligand-Water interactions- Metal complexes: C:D.191, C:E.219, C:D.244, H2O.358
MG.4: 6 residues within 4Å:- Chain D: K.160, D.191, N.193, E.219, D.244
- Ligands: ALA-GLU.12
4 PLIP interactions:3 interactions with chain D, 1 Ligand-Water interactions- Metal complexes: D:D.191, D:E.219, D:D.244, H2O.558
MG.5: 6 residues within 4Å:- Chain E: K.160, D.191, N.193, E.219, D.244
- Ligands: ALA-GLU.13
4 PLIP interactions:3 interactions with chain E, 1 Ligand-Water interactions- Metal complexes: E:D.191, E:E.219, E:D.244, H2O.752
MG.6: 6 residues within 4Å:- Chain F: K.160, D.191, N.193, E.219, D.244
- Ligands: ALA-GLU.14
4 PLIP interactions:3 interactions with chain F, 1 Ligand-Water interactions- Metal complexes: F:D.191, F:E.219, F:D.244, H2O.966
MG.7: 6 residues within 4Å:- Chain G: K.160, D.191, E.219, D.244, K.268
- Ligands: ALA-GLU.15
4 PLIP interactions:3 interactions with chain G, 1 Ligand-Water interactions- Metal complexes: G:D.191, G:E.219, G:D.244, H2O.1146
MG.8: 5 residues within 4Å:- Chain H: K.160, D.191, E.219, D.244
- Ligands: ALA-GLU.16
4 PLIP interactions:3 interactions with chain H, 1 Ligand-Water interactions- Metal complexes: H:D.191, H:E.219, H:D.244, H2O.1314
- 8 x ALA- GLU: ALANINE(Non-covalent)
ALA-GLU.9: 16 residues within 4Å:- Chain A: F.19, R.24, I.54, T.135, K.160, K.162, D.191, E.219, D.244, K.268, S.296, M.297, I.298, D.321, D.323
- Ligands: MG.1
11 PLIP interactions:11 interactions with chain A- Hydrophobic interactions: A:F.19, A:I.298
- Hydrogen bonds: A:K.160, A:K.162, A:K.268, A:S.296, A:I.298, A:D.323
- Water bridges: A:D.321, A:D.321
- Salt bridges: A:R.24
ALA-GLU.10: 18 residues within 4Å:- Chain B: F.19, R.24, I.54, T.135, K.160, K.162, D.191, E.219, D.244, N.266, K.268, S.296, M.297, I.298, D.321, D.323, M.327
- Ligands: MG.2
13 PLIP interactions:13 interactions with chain B- Hydrophobic interactions: B:F.19, B:F.19
- Hydrogen bonds: B:K.160, B:K.162, B:N.266, B:K.268, B:S.296, B:I.298, B:D.323
- Water bridges: B:D.321, B:D.321, B:A.324
- Salt bridges: B:R.24
ALA-GLU.11: 16 residues within 4Å:- Chain C: F.19, R.24, I.54, T.135, K.160, K.162, D.191, E.219, D.244, K.268, S.296, M.297, I.298, D.321, D.323
- Ligands: MG.3
13 PLIP interactions:13 interactions with chain C- Hydrophobic interactions: C:F.19, C:F.19
- Hydrogen bonds: C:T.135, C:K.160, C:K.162, C:D.191, C:N.266, C:K.268, C:S.296, C:I.298, C:D.323
- Water bridges: C:S.296
- Salt bridges: C:R.24
ALA-GLU.12: 16 residues within 4Å:- Chain D: F.19, R.24, I.54, T.135, K.160, K.162, D.191, E.219, D.244, K.268, S.296, M.297, I.298, D.321, D.323
- Ligands: MG.4
13 PLIP interactions:13 interactions with chain D- Hydrophobic interactions: D:F.19, D:F.19
- Hydrogen bonds: D:T.135, D:K.160, D:K.162, D:N.266, D:K.268, D:S.296, D:I.298, D:D.323
- Water bridges: D:S.296, D:A.324
- Salt bridges: D:R.24
ALA-GLU.13: 18 residues within 4Å:- Chain E: F.19, R.24, I.54, T.135, K.160, K.162, D.191, E.219, D.244, N.266, K.268, S.296, M.297, I.298, D.321, D.323, M.327
- Ligands: MG.5
13 PLIP interactions:13 interactions with chain E- Hydrophobic interactions: E:F.19, E:I.298
- Hydrogen bonds: E:K.160, E:K.162, E:N.266, E:K.268, E:S.296, E:I.298, E:D.321, E:D.323
- Water bridges: E:S.296, E:A.324
- Salt bridges: E:R.24
ALA-GLU.14: 16 residues within 4Å:- Chain F: F.19, R.24, I.54, T.135, K.160, K.162, D.191, E.219, D.244, K.268, S.296, M.297, I.298, D.321, D.323
- Ligands: MG.6
13 PLIP interactions:13 interactions with chain F- Hydrophobic interactions: F:F.19, F:I.298
- Hydrogen bonds: F:T.135, F:K.160, F:K.162, F:K.268, F:S.296, F:I.298, F:D.321, F:D.323
- Water bridges: F:N.266, F:S.296
- Salt bridges: F:R.24
ALA-GLU.15: 16 residues within 4Å:- Chain G: F.19, R.24, I.54, T.135, K.160, K.162, D.191, E.219, D.244, K.268, S.296, M.297, I.298, D.321, D.323
- Ligands: MG.7
13 PLIP interactions:13 interactions with chain G- Hydrophobic interactions: G:F.19, G:I.298
- Hydrogen bonds: G:T.135, G:K.160, G:K.162, G:K.268, G:S.296, G:I.298, G:D.323
- Water bridges: G:N.266, G:S.296, G:A.324
- Salt bridges: G:R.24
ALA-GLU.16: 16 residues within 4Å:- Chain H: F.19, R.24, I.54, T.135, K.160, K.162, D.191, E.219, D.244, K.268, S.296, M.297, I.298, D.321, D.323
- Ligands: MG.8
11 PLIP interactions:11 interactions with chain H- Hydrophobic interactions: H:F.19
- Hydrogen bonds: H:T.135, H:K.160, H:K.162, H:K.268, H:S.296, H:I.298, H:D.323
- Water bridges: H:N.266, H:S.296
- Salt bridges: H:R.24
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Klenchin, V.A. et al., Evolution of Enzymatic Activities in the Enolase Superfamily: Structure of a Substrate-Liganded Complex of the l-Ala-d/l-Glu Epimerase from Bacillus subtilis(,). Biochemistry (2004)
- Release Date
- 2004-08-31
- Peptides
- similar to chloromuconate cycloisomerase: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
H
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-octamer
- Ligands
- 8 x MG: MAGNESIUM ION(Non-covalent)
- 8 x ALA- GLU: ALANINE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Klenchin, V.A. et al., Evolution of Enzymatic Activities in the Enolase Superfamily: Structure of a Substrate-Liganded Complex of the l-Ala-d/l-Glu Epimerase from Bacillus subtilis(,). Biochemistry (2004)
- Release Date
- 2004-08-31
- Peptides
- similar to chloromuconate cycloisomerase: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
H