SMTL ID : 1tmo.1

TRIMETHYLAMINE N-OXIDE REDUCTASE FROM SHEWANELLA MASSILIA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

2 x 2MD: GUANYLATE-O'-PHOSPHORIC ACID MONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,5,6,7,8A,9,10,10A-OCTAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL) ESTER(Non-covalent)

2MD.1: 31 residues within 4Å: Chain A: G.148, W.149, R.150, A.151, S.158, Y.179, S.180, R.363, G.472, N.473, N.474, N.477, H.478, Q.480, V.498, D.499, T.503, A.515, R.521, D.551, S.680, H.682, L.687, H.688, S.689, Q.690, E.755, N.784, Y.802 Ligands: 2MD.2, 2MO.3 28 PLIP interactions: 28 interactions with chain A Hydrogen bonds: A:W.149, A:A.151, A:S.158, A:R.363, A:G.472, A:N.474, A:N.477, A:H.478, A:Q.480, A:V.498, A:R.521, A:S.680, A:S.680, A:H.682, A:L.687, A:S.689, A:Q.690, A:Q.690, A:N.784, A:N.784, A:Y.802 Water bridges: A:S.158, A:N.473, A:N.473, A:T.503 Salt bridges: A:H.478, A:D.551, A:H.688 2MD.2: 26 residues within 4Å: Chain A: S.180, S.218, K.223, N.224, V.227, I.257, D.258, P.259, T.262, Q.278, D.280, W.359, C.360, R.363, Q.364, W.677, Q.679, C.681, H.682, P.683, R.686, L.687, H.688, Y.802 Ligands: 2MD.1, 2MO.3 23 PLIP interactions: 23 interactions with chain A Hydrogen bonds: A:K.223, A:N.224, A:N.224, A:Q.226, A:I.257, A:Q.278, A:W.359, A:C.360, A:Q.364, A:Q.679, A:H.682, A:R.686, A:H.688, A:H.688 Water bridges: A:D.220, A:D.220, A:D.280, A:R.752 Salt bridges: A:K.223, A:D.258, A:D.280, A:R.363, A:H.682

1 x 2MO: MOLYBDENUM (IV)OXIDE(Covalent)

2MO.3: 4 residues within 4Å: Chain A: W.149, S.180 Ligands: 2MD.1, 2MD.2 1 PLIP interactions: 1 interactions with chain A Water bridges: A:Y.179

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Czjzek, M. et al., Crystal structure of oxidized trimethylamine N-oxide reductase from Shewanella massilia at 2.5 A resolution. J.Mol.Biol. (1998)

Release Date

1999-03-30

Peptides

TRIMETHYLAMINE N-OXIDE REDUCTASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

TRIMETHYLAMINE N-OXIDE REDUCTASE