SMTL ID : 1tr0.1 (1 other biounit)

Crystal Structure of a boiling stable protein SP1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-12-mer

Ligands

12 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: H.11, L.13, Y.33, Y.80, L.86, R.100, V.102 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.33, A:Y.33, A:Y.80, A:R.100, A:R.100 GOL.2: 7 residues within 4Å: Chain B: H.11, L.13, Y.33, Y.80, L.86, R.100, V.102 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Y.33, B:R.100 GOL.3: 7 residues within 4Å: Chain C: H.11, L.13, Y.33, Y.80, L.86, R.100, V.102 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:Y.33, C:Y.80, C:R.100 GOL.4: 7 residues within 4Å: Chain D: H.11, L.13, Y.33, Y.80, L.86, R.100, V.102 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:Y.33, D:Y.80, D:R.100, D:R.100 GOL.5: 7 residues within 4Å: Chain E: H.11, L.13, Y.33, Y.80, L.86, R.100, V.102 3 PLIP interactions: 3 interactions with chain E Hydrogen bonds: E:Y.33, E:Y.80, E:R.100 GOL.6: 7 residues within 4Å: Chain F: H.11, L.13, Y.33, Y.80, L.86, R.100, V.102 4 PLIP interactions: 4 interactions with chain F Hydrogen bonds: F:Y.33, F:Y.80, F:R.100, F:R.100 GOL.7: 7 residues within 4Å: Chain G: H.11, L.13, Y.33, Y.80, L.86, R.100, V.102 2 PLIP interactions: 2 interactions with chain G Hydrogen bonds: G:Y.33, G:R.100 GOL.8: 7 residues within 4Å: Chain H: H.11, L.13, Y.33, Y.80, L.86, R.100, V.102 6 PLIP interactions: 6 interactions with chain H Hydrogen bonds: H:Y.33, H:Y.33, H:Y.80, H:R.100, H:R.100 Water bridges: H:H.11 GOL.9: 7 residues within 4Å: Chain I: H.11, L.13, Y.33, Y.80, L.86, R.100, V.102 3 PLIP interactions: 3 interactions with chain I Hydrogen bonds: I:Y.33, I:Y.33, I:R.100 GOL.10: 7 residues within 4Å: Chain J: H.11, L.13, Y.33, Y.80, L.86, R.100, V.102 3 PLIP interactions: 3 interactions with chain J Hydrogen bonds: J:Y.33, J:Y.33, J:R.100 GOL.11: 7 residues within 4Å: Chain K: H.11, L.13, Y.33, Y.80, L.86, R.100, V.102 3 PLIP interactions: 3 interactions with chain K Hydrogen bonds: K:Y.33, K:Y.33, K:R.100 GOL.12: 7 residues within 4Å: Chain L: H.11, L.13, Y.33, Y.80, L.86, R.100, V.102 4 PLIP interactions: 4 interactions with chain L Hydrogen bonds: L:Y.33, L:Y.33, L:R.100, L:R.100

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dgany, O. et al., The structural basis of the thermostability of SP1, a novel plant (Populus tremula) boiling stable protein. J.Biol.Chem. (2004)

Release Date

2004-09-21

Peptides

stable protein 1: ABCDEFGHIJKL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

K
K

L
L

stable protein 1

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