SMTL ID : 1tr5.1

Room temperature structure of Staphylococcal nuclease variant truncated Delta+PHS I92E

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: D.21, D.40, T.41, E.43 Ligands: THP.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.21, A:D.40, A:T.41

1 x THP: THYMIDINE-3',5'-DIPHOSPHATE(Non-covalent)

THP.2: 12 residues within 4Å: Chain A: R.35, L.36, L.37, D.40, D.77, K.78, Y.79, R.81, L.83, Y.107, Y.109 Ligands: CA.1 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:Y.107, A:Y.107 Hydrogen bonds: A:D.77, A:R.81 Water bridges: A:K.78 Salt bridges: A:R.35, A:K.78, A:R.81

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nguyen, D.M. et al., X-ray and thermodynamic studies of staphylococcal nuclease variants I92E and I92K: insights into polarity of the protein interior. J.Mol.Biol. (2004)

Release Date

2004-07-06

Peptides

Thermonuclease: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Thermonuclease

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