- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)
- 2 x 2KT: 2-KETOBUTYRIC ACID(Non-covalent)
2KT.2: 11 residues within 4Å:- Chain A: K.51, I.73, G.74, S.78, N.79, Q.80, A.160, G.161, Y.268, Y.294
- Ligands: PLP.1
9 PLIP interactions:9 interactions with chain A- Hydrophobic interactions: A:Q.80
- Hydrogen bonds: A:N.79, A:N.79, A:Q.80, A:G.161, A:Y.268, A:Y.294
- Water bridges: A:Y.268
- Salt bridges: A:K.51
2KT.6: 10 residues within 4Å:- Chain C: K.51, G.74, G.75, S.78, N.79, Q.80, W.102, G.161, Y.294
- Ligands: PLP.5
10 PLIP interactions:10 interactions with chain C- Hydrophobic interactions: C:Q.80, C:W.102
- Hydrogen bonds: C:N.79, C:N.79, C:Q.80, C:Y.268, C:Y.268
- Water bridges: C:G.75, C:S.78
- Salt bridges: C:K.51
- 2 x SO4: SULFATE ION(Non-functional Binders)
SO4.3: 7 residues within 4Å:- Chain B: K.51, S.78, N.79, Q.80, Y.268, Y.294
- Ligands: PLP.4
9 PLIP interactions:9 interactions with chain B- Hydrogen bonds: B:S.78, B:N.79, B:N.79, B:Q.80
- Water bridges: B:S.78, B:S.78, B:Y.268, B:Y.268
- Salt bridges: B:K.51
SO4.7: 7 residues within 4Å:- Chain D: K.51, S.78, N.79, Q.80, Y.268, Y.294
- Ligands: PLP.8
8 PLIP interactions:8 interactions with chain D- Hydrogen bonds: D:S.78, D:N.79, D:Q.80, D:Y.268, D:Y.294
- Water bridges: D:S.78, D:S.78
- Salt bridges: D:K.51
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Karthikeyan, S. et al., Structural Analysis of Pseudomonas 1-Aminocyclopropane-1-carboxylate Deaminase Complexes: Insight into the Mechanism of a Unique Pyridoxal-5'-phosphate Dependent Cyclopropane Ring-Opening Reaction. Biochemistry (2004)
- Release Date
- 2004-11-02
- Peptides
- 1-aminocyclopropane-1-carboxylate deaminase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)
- 2 x 2KT: 2-KETOBUTYRIC ACID(Non-covalent)
- 2 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Karthikeyan, S. et al., Structural Analysis of Pseudomonas 1-Aminocyclopropane-1-carboxylate Deaminase Complexes: Insight into the Mechanism of a Unique Pyridoxal-5'-phosphate Dependent Cyclopropane Ring-Opening Reaction. Biochemistry (2004)
- Release Date
- 2004-11-02
- Peptides
- 1-aminocyclopropane-1-carboxylate deaminase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D