SMTL ID : 1tzl.1 (1 other biounit)

Crystal Structure of Pyranose 2-Oxidase from the White-Rot Fungus Peniophora sp.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

homo-tetramer

Ligands

4 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Covalent)

FAD.1: 32 residues within 4Å: Chain A: V.51, G.52, G.54, P.55, I.56, F.74, D.75, I.76, I.106, T.157, R.158, V.159, G.162, M.163, S.164, H.166, W.167, T.168, C.169, A.170, V.280, C.282, T.318, A.319, G.320, H.323, L.546, H.547, G.581, C.582, N.592, T.594 26 PLIP interactions: 26 interactions with chain A Hydrophobic interactions: A:I.106, A:W.167, A:L.546 Hydrogen bonds: A:G.54, A:I.56, A:G.57, A:I.76, A:T.157, A:V.159, A:G.162, A:S.164, A:T.168, A:T.168, A:A.170, A:A.170, A:C.282, A:C.282, A:N.592, A:T.594, A:T.594, A:T.594 Water bridges: A:H.323, A:L.546, A:L.595 pi-Stacking: A:W.167, A:H.547 FAD.2: 35 residues within 4Å: Chain B: V.51, G.52, S.53, G.54, P.55, I.56, D.75, I.76, G.77, T.157, R.158, V.159, G.162, M.163, S.164, H.166, W.167, T.168, C.169, A.170, V.280, A.281, C.282, T.318, A.319, G.320, H.323, L.327, L.546, H.547, G.581, C.582, N.592, P.593, T.594 26 PLIP interactions: 26 interactions with chain B Hydrophobic interactions: B:W.167, B:L.546 Hydrogen bonds: B:S.53, B:G.54, B:I.56, B:I.76, B:G.77, B:T.157, B:V.159, B:G.162, B:T.168, B:C.169, B:A.170, B:A.170, B:C.282, B:C.282, B:N.592, B:T.594, B:T.594, B:T.594 Water bridges: B:G.57, B:T.168, B:T.168, B:G.320 pi-Stacking: B:W.167, B:H.547 FAD.3: 35 residues within 4Å: Chain C: V.51, G.52, S.53, G.54, P.55, I.56, D.75, I.76, G.77, I.106, T.157, R.158, V.159, G.162, M.163, S.164, H.166, W.167, T.168, C.169, A.170, V.280, A.281, C.282, T.318, A.319, G.320, H.323, L.546, H.547, G.581, C.582, N.592, P.593, T.594 25 PLIP interactions: 25 interactions with chain C Hydrophobic interactions: C:I.106, C:L.546 Hydrogen bonds: C:G.54, C:I.56, C:I.76, C:G.77, C:T.157, C:V.159, C:G.162, C:S.164, C:T.168, C:C.169, C:A.170, C:A.170, C:C.282, C:C.282, C:N.592, C:T.594, C:T.594, C:T.594 Water bridges: C:G.320, C:L.546, C:L.595 pi-Stacking: C:W.167, C:H.547 FAD.4: 35 residues within 4Å: Chain D: V.51, G.52, S.53, G.54, P.55, I.56, F.74, D.75, I.76, G.77, I.106, L.110, T.157, R.158, V.159, G.162, M.163, S.164, H.166, W.167, T.168, C.169, A.170, V.280, C.282, T.318, A.319, G.320, H.323, L.546, H.547, C.582, N.592, P.593, T.594 26 PLIP interactions: 26 interactions with chain D Hydrophobic interactions: D:I.106, D:L.110, D:L.546 Hydrogen bonds: D:S.53, D:G.54, D:I.56, D:I.76, D:G.77, D:T.157, D:V.159, D:G.162, D:S.164, D:T.168, D:C.169, D:A.170, D:A.170, D:C.282, D:C.282, D:N.592, D:T.594, D:T.594, D:T.594 Water bridges: D:G.57, D:G.320 pi-Stacking: D:W.167, D:H.547

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bannwarth, M. et al., Crystal structure of pyranose 2-oxidase from the white-rot fungus peniophora sp. Biochemistry (2004)

Release Date

2004-10-19

Peptides

pyranose oxidase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

pyranose oxidase

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