SMTL ID : 1u5a.1

Plasmodium falciparum lactate dehydrogenase complexed with 3,5-dihydroxy-2-naphthoic acid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-tetramer

Ligands

4 x BIK: 3,7-DIHYDROXY-2-NAPHTHOIC ACID(Non-covalent)

BIK.1: 7 residues within 4Å: Chain A: N.126, L.153, D.154, R.157, H.181, A.224, P.234 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:N.126, A:A.224 Hydrogen bonds: A:D.154 Water bridges: A:A.224, A:P.234 Salt bridges: A:R.157, A:H.181 BIK.2: 7 residues within 4Å: Chain B: N.126, L.153, D.154, R.157, H.181, A.224, P.234 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:N.126, B:A.224 Hydrogen bonds: B:D.154 Water bridges: B:A.224, B:P.234 Salt bridges: B:R.157, B:H.181 BIK.3: 7 residues within 4Å: Chain C: N.126, L.153, D.154, R.157, H.181, A.224, P.234 7 PLIP interactions: 7 interactions with chain C Hydrophobic interactions: C:N.126, C:A.224 Hydrogen bonds: C:D.154 Water bridges: C:A.224, C:P.234 Salt bridges: C:R.157, C:H.181 BIK.4: 7 residues within 4Å: Chain D: N.126, L.153, D.154, R.157, H.181, A.224, P.234 7 PLIP interactions: 7 interactions with chain D Hydrophobic interactions: D:N.126, D:A.224 Hydrogen bonds: D:D.154 Water bridges: D:A.224, D:P.234 Salt bridges: D:R.157, D:H.181

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Conners, R. et al., Mapping the binding site for gossypol-like inhibitors of Plasmodium falciparum lactate dehydrogenase. Mol.Biochem.Parasitol. (2005)

Release Date

2005-06-21

Peptides

L-lactate dehydrogenase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

L-lactate dehydrogenase

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