SMTL ID : 1ubx.1

STRUCTURE OF FARNESYL PYROPHOSPHATE SYNTHETASE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 5 residues within 4Å: Chain A: D.117, D.118, D.121, S.123 Ligands: FPP.2 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.117 MG.3: 5 residues within 4Å: Chain B: D.117, D.118, D.121, S.123 Ligands: FPP.4 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:D.117

2 x FPP: FARNESYL DIPHOSPHATE(Non-covalent)

FPP.2: 17 residues within 4Å: Chain A: F.109, S.113, A.116, D.117, M.120, D.121, R.126, A.178, T.181, E.182, Q.185, D.188, K.214, Y.218 Chain B: N.144, F.147 Ligands: MG.1 13 PLIP interactions: 12 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:F.109, A:A.116, A:D.117, A:A.178, A:E.182, A:Q.185, A:Q.185, A:K.214, B:F.147 Hydrogen bonds: A:D.117, A:D.188 Salt bridges: A:R.126, A:K.214 FPP.4: 17 residues within 4Å: Chain A: N.144, F.147 Chain B: F.109, S.113, A.116, D.117, M.120, D.121, R.126, A.178, T.181, E.182, Q.185, D.188, K.214, Y.218 Ligands: MG.3 13 PLIP interactions: 12 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:F.109, B:A.116, B:D.117, B:A.178, B:E.182, B:Q.185, B:Q.185, B:K.214, A:F.147 Hydrogen bonds: B:D.117, B:D.188 Salt bridges: B:R.126, B:K.214

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tarshis, L.C. et al., Regulation of product chain length by isoprenyl diphosphate synthases. Proc.Natl.Acad.Sci.USA (1996)

Release Date

1997-03-12

Peptides

FARNESYL DIPHOSPHATE SYNTHASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

FARNESYL DIPHOSPHATE SYNTHASE