- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x PO4: PHOSPHATE ION(Non-functional Binders)
- 12 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 6 residues within 4Å:- Chain A: V.102, E.103, L.104, T.105, K.156
- Chain E: E.206
6 PLIP interactions:5 interactions with chain A, 1 interactions with chain E- Hydrogen bonds: A:E.103, A:L.104, A:T.105, A:T.105, E:E.206
- Salt bridges: A:K.156
SO4.3: 4 residues within 4Å:- Chain A: W.58, T.60, R.92, R.99
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:T.60
- Water bridges: A:W.58, A:T.60, A:A.61
- Salt bridges: A:R.99
SO4.5: 6 residues within 4Å:- Chain B: V.102, E.103, L.104, T.105, K.156
- Chain D: E.206
6 PLIP interactions:5 interactions with chain B, 1 interactions with chain D- Hydrogen bonds: B:E.103, B:L.104, B:T.105, B:T.105, D:E.206
- Salt bridges: B:K.156
SO4.6: 4 residues within 4Å:- Chain B: W.58, T.60, R.92, R.99
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:T.60
- Water bridges: B:W.58, B:T.60, B:A.61
- Salt bridges: B:R.99
SO4.8: 6 residues within 4Å:- Chain C: V.102, E.103, L.104, T.105, K.156
- Chain F: E.206
6 PLIP interactions:5 interactions with chain C, 1 interactions with chain F- Hydrogen bonds: C:E.103, C:L.104, C:T.105, C:T.105, F:E.206
- Salt bridges: C:K.156
SO4.9: 4 residues within 4Å:- Chain C: W.58, T.60, R.92, R.99
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:T.60
- Water bridges: C:W.58, C:T.60, C:A.61
- Salt bridges: C:R.99
SO4.11: 6 residues within 4Å:- Chain B: E.206
- Chain D: V.102, E.103, L.104, T.105, K.156
4 PLIP interactions:4 interactions with chain D- Hydrogen bonds: D:E.103, D:L.104, D:T.105
- Salt bridges: D:K.156
SO4.12: 4 residues within 4Å:- Chain D: W.58, T.60, R.92, R.99
4 PLIP interactions:4 interactions with chain D- Water bridges: D:T.60, D:T.60, D:A.61
- Salt bridges: D:R.99
SO4.14: 6 residues within 4Å:- Chain A: E.206
- Chain E: V.102, E.103, L.104, T.105, K.156
4 PLIP interactions:4 interactions with chain E- Hydrogen bonds: E:E.103, E:L.104, E:T.105
- Salt bridges: E:K.156
SO4.15: 4 residues within 4Å:- Chain E: W.58, T.60, R.92, R.99
4 PLIP interactions:4 interactions with chain E- Water bridges: E:T.60, E:T.60, E:A.61
- Salt bridges: E:R.99
SO4.17: 6 residues within 4Å:- Chain C: E.206
- Chain F: V.102, E.103, L.104, T.105, K.156
4 PLIP interactions:4 interactions with chain F- Hydrogen bonds: F:E.103, F:L.104, F:T.105
- Salt bridges: F:K.156
SO4.18: 4 residues within 4Å:- Chain F: W.58, T.60, R.92, R.99
4 PLIP interactions:4 interactions with chain F- Water bridges: F:T.60, F:T.60, F:A.61
- Salt bridges: F:R.99
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ishii, R. et al., Crystal Structure of the tRNA Processing Enzyme RNase PH from Aquifex aeolicus. J.Biol.Chem. (2003)
- Release Date
- 2003-09-23
- Peptides
- Ribonuclease PH: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x PO4: PHOSPHATE ION(Non-functional Binders)
- 12 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ishii, R. et al., Crystal Structure of the tRNA Processing Enzyme RNase PH from Aquifex aeolicus. J.Biol.Chem. (2003)
- Release Date
- 2003-09-23
- Peptides
- Ribonuclease PH: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
A