SMTL ID : 1uf3.1

Crystal structure of TT1561 of thermus thermophilus HB8

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-octamer

Ligands

14 x CA: CALCIUM ION(Non-covalent)

CA.1: 3 residues within 4Å: Chain A: K.45, A.47, A.75 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:K.45, A:A.47, A:A.75, H2O.2, H2O.2 CA.2: 3 residues within 4Å: Chain A: E.125 Chain B: E.99, E.125 No protein-ligand interaction detected (PLIP) CA.3: 3 residues within 4Å: Chain B: K.45, A.47, A.75 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:A.47, B:A.75, H2O.5, H2O.8, H2O.8 CA.4: 3 residues within 4Å: Chain C: K.45, A.47, A.75 5 PLIP interactions: 3 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:K.45, C:A.47, C:A.75, H2O.9, H2O.10 CA.5: 3 residues within 4Å: Chain C: E.99, E.125 Chain D: E.99 No protein-ligand interaction detected (PLIP) CA.6: 4 residues within 4Å: Chain D: K.45, A.47, A.75, P.76 5 PLIP interactions: 3 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:K.45, D:A.47, D:A.75, H2O.12, H2O.14 CA.7: 3 residues within 4Å: Chain D: G.32, D.34 Chain G: M.1 5 PLIP interactions: 2 interactions with chain D, 3 Ligand-Water interactions Metal complexes: D:G.32, D:D.34, H2O.15, H2O.15, H2O.27 CA.8: 4 residues within 4Å: Chain E: K.45, A.47, A.75, P.76 5 PLIP interactions: 3 interactions with chain E, 2 Ligand-Water interactions Metal complexes: E:K.45, E:A.47, E:A.75, H2O.16, H2O.17 CA.9: 4 residues within 4Å: Chain E: E.99, E.125 Chain F: E.125, R.139 No protein-ligand interaction detected (PLIP) CA.10: 5 residues within 4Å: Chain F: K.45, A.47, A.75, P.76, E.79 5 PLIP interactions: 3 interactions with chain F, 2 Ligand-Water interactions Metal complexes: F:K.45, F:A.47, F:A.75, H2O.22, H2O.22 CA.11: 4 residues within 4Å: Chain A: G.32, D.34 Chain F: M.1, R.105 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:G.32, A:D.34, H2O.2, H2O.20, H2O.21 CA.12: 4 residues within 4Å: Chain G: K.45, A.47, A.75, P.76 5 PLIP interactions: 3 interactions with chain G, 2 Ligand-Water interactions Metal complexes: G:K.45, G:A.47, G:A.75, H2O.24, H2O.25 CA.13: 3 residues within 4Å: Chain G: E.99, E.125 Chain H: E.125 No protein-ligand interaction detected (PLIP) CA.14: 3 residues within 4Å: Chain H: K.45, A.47, A.75 5 PLIP interactions: 3 interactions with chain H, 2 Ligand-Water interactions Metal complexes: H:K.45, H:A.47, H:A.75, H2O.30, H2O.30

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kato-Murayama, M. et al., Crystal structure of TT1561 of thermus thermophilus HB8. To be Published

Release Date

2003-11-23

Peptides

hypothetical protein TT1561: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

hypothetical protein TT1561