SMTL ID : 1uk9.1

Crystal structure of a meta-cleavage product hydrolase (CumD) complexed with isovalerate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

2 x IVA: ISOVALERIC ACID(Non-covalent)

IVA.1: 10 residues within 4Å: Chain A: G.33, S.34, A.103, F.104, G.127, A.129, L.139, W.143, V.227, H.252 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:A.103, A:A.129, A:L.139, A:L.139, A:V.227 Hydrogen bonds: A:S.34, A:S.34, A:F.104 Salt bridges: A:H.252 IVA.2: 10 residues within 4Å: Chain B: G.33, S.34, A.103, F.104, G.127, A.129, L.139, W.143, V.227, H.252 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:A.103, B:A.129, B:L.139, B:L.139, B:V.227 Hydrogen bonds: B:S.34, B:S.34, B:F.104 Salt bridges: B:H.252

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fushinobu, S. et al., A Series of Crystal Structures of a meta-Cleavage Product Hydrolase from Pseudomonas fluorescens IP01 (CumD) Complexed with Various Cleavage Products. BIOSCI.BIOTECHNOL.BIOCHEM. (2005)

Release Date

2004-09-14

Peptides

2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase

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