SMTL ID : 1umy.1

BHMT from rat liver

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-tetramer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: Y.160, C.217, C.299, C.300 Ligands: BME.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:Y.160, A:C.217, A:C.299, A:C.300 ZN.3: 4 residues within 4Å: Chain B: Y.160, C.217, C.299, C.300 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:Y.160, B:C.217, B:C.299, B:C.300 ZN.5: 4 residues within 4Å: Chain C: Y.160, C.217, C.299, C.300 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:Y.160, C:C.217, C:C.299, C:C.300, H2O.16 ZN.6: 4 residues within 4Å: Chain D: Y.160, C.217, C.299, C.300 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:C.217, D:C.299, D:C.300

2 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.2: 3 residues within 4Å: Chain A: Y.160, C.300 Ligands: ZN.1 No protein-ligand interaction detected (PLIP) BME.4: 1 residues within 4Å: Chain B: Y.160 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gonzalez, B. et al., Crystal structure of rat liver betaine homocysteine s-methyltransferase reveals new oligomerization features and conformational changes upon substrate binding. J. Mol. Biol. (2004)

Release Date

2004-05-06

Peptides

Betaine--homocysteine S-methyltransferase 1: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Betaine--homocysteine S-methyltransferase 1