SMTL ID : 1uoe.1

CRYSTAL STRUCTURE OF THE DIHYDROXYACETONE KINASE FROM E. COLI IN COMPLEX WITH GLYCERALDEHYDE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 10 residues within 4Å: Chain A: G.62, G.63, H.66, F.88, T.89, S.90, K.114, Y.116, D.119, H.228 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.63, A:K.114 GOL.3: 10 residues within 4Å: Chain B: G.62, G.63, H.66, F.88, T.89, S.90, K.114, Y.116, D.119, H.228 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:G.63, B:K.114, B:H.228

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: A.32, H.33, P.34, S.35 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.35, A:S.35, A:S.35 Water bridges: A:H.33 Salt bridges: A:H.33 SO4.4: 3 residues within 4Å: Chain B: H.33, P.34, S.35 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:S.35, B:S.35, B:S.35 Salt bridges: B:H.33

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Garcia-Alles, L.F. et al., Phosphoenolpyruvate- and ATP-Dependent Dihydroxyacetone Kinases: Covalent Substrate-Binding and Kinetic Mechanism. Biochemistry (2004)

Release Date

2004-09-24

Peptides

DIHYDROXYACETONE KINASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

DIHYDROXYACETONE KINASE