SMTL ID : 1up3.1

Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with METHYL-CELLOBIOSYL-4-DEOXY-4-THIO-BETA-D-CELLOBIOSIDE at 1.6 angstrom

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x MGL- SGC- BGC- BGC: beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-4-thio-beta-D-glucopyranose-(1-4)-methyl beta-D-glucopyranoside

MGL-SGC-BGC-BGC.1: 10 residues within 4Å: Chain A: D.82, D.120, M.124, H.161, R.163, W.164, V.189, N.191, W.233 Ligands: SO4.2 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:D.82, A:D.82, A:V.189, A:N.191 Water bridges: A:S.85, A:D.120, A:S.190

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 6 residues within 4Å: Chain A: P.230, L.231, W.233 Ligands: MGL-SGC-BGC-BGC.1, MGL-SGC-BGC-BGC.1, MGL-SGC-BGC-BGC.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.231, A:W.233 SO4.3: 4 residues within 4Å: Chain A: A.2, N.3, R.183, H.213 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.2 Salt bridges: A:R.183, A:H.213 SO4.4: 6 residues within 4Å: Chain A: Y.86, T.269, C.270, G.271, R.272, G.273 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.269, A:T.269, A:G.271, A:R.272, A:G.273

4 x 1PG: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL(Non-covalent)

1PG.5: 9 residues within 4Å: Chain A: N.235, P.236, S.237, G.238, R.239, Y.284, D.287, L.288, N.291 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.239, A:R.239 Water bridges: A:G.238, A:D.287, A:D.287 1PG.6: 7 residues within 4Å: Chain A: Y.11, D.13, P.14, Y.42, R.59, Y.60, A.63 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.59 Water bridges: A:Y.11, A:R.59 1PG.7: 5 residues within 4Å: Chain A: M.19, A.22, P.28, T.33, N.37 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:P.28 Hydrogen bonds: A:N.37 1PG.8: 4 residues within 4Å: Chain A: H.80, C.83, G.84, Q.132 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.80

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Varrot, A. et al., Mycobacterium Tuberculosis Strains Possess Functional Cellulases. J.Biol.Chem. (2005)

Release Date

2004-11-18

Peptides

PUTATIVE CELLULASE CEL6: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PUTATIVE CELLULASE CEL6

Related Entries With Identical Sequence