SMTL ID : 1url.1

N-TERMINAL DOMAIN OF SIALOADHESIN (MOUSE) IN COMPLEX WITH GLYCOPEPTIDE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x GLY- HIS- THR- TRP- GLY- HIA: ALA-GLY-HIS-THR-TRP-GLY-HIA(Non-covalent)

GLY-HIS-THR-TRP-GLY-HIA.1: 4 residues within 4Å: Chain A: S.45, R.48, V.109 Ligands: SIA.2 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:V.109 Hydrogen bonds: A:R.48, A:R.48

1 x SIA: N-acetyl-alpha-neuraminic acid(Non-covalent)

SIA.2: 9 residues within 4Å: Chain A: W.2, R.97, R.105, W.106, L.107, V.109 Ligands: GLY-HIS-THR-TRP-GLY-HIA.1, GLY-HIS-THR-TRP-GLY-HIA.1, GLY-HIS-THR-TRP-GLY-HIA.1 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:W.2, A:W.106 Hydrogen bonds: A:S.103, A:R.105, A:L.107 Water bridges: A:R.97 Salt bridges: A:R.97, A:R.105

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bukrinsky, J.T. et al., Complex of Sialoadhesin with a Glycopeptide Ligand. Biochim.Biophys.Acta (2004)

Release Date

2004-10-20

Peptides

SIALOADHESIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SIALOADHESIN