SMTL ID : 1uvj.3 (2 other biounits)

The structural basis for RNA specificity and Ca2 inhibition of an RNA-dependent RNA polymerase phi6p2 with 7nt RNA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x U- U- C- C: 5'-R(*UP*UP*CP*CP)-3'(Non-covalent)

U-U-C-C.1: 30 residues within 4Å: Chain A: K.23, R.30, S.149, S.150, C.152, F.156, Y.200, V.202, R.204, A.272, M.273, G.274, G.275, M.284, R.291, Y.295, S.393, G.394, Q.395, G.396, T.398, D.399, K.451, K.543, N.626, L.628, Q.629, W.632, T.633, E.634 Protein-ligand interaction information (PLIP) not available

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.2: 4 residues within 4Å: Chain A: T.323, D.454, E.491, A.495 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.454, A:E.491, A:A.495, H2O.6, H2O.6

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Salgado, P.S. et al., The structural basis for RNA specificity and Ca2+ inhibition of an RNA-dependent RNA polymerase. Structure (2004)

Release Date

2004-02-19

Peptides

RNA-directed RNA polymerase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

RNA-directed RNA polymerase

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