SMTL ID : 1uxe.1

ADENOVIRUS AD37 FIBRE HEAD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-trimer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 3 residues within 4Å: Chain A: H.60, E.180 Ligands: ACT.2 5 PLIP interactions: 2 interactions with chain A, 1 Ligand-Ligand interactions, 2 Ligand-Water interactions Metal complexes: A:H.60, A:E.180, ACT.2, H2O.5, H2O.5 ZN.3: 2 residues within 4Å: Chain B: H.60, E.180 4 PLIP interactions: 2 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:H.60, B:E.180, H2O.9, H2O.10 ZN.4: 2 residues within 4Å: Chain C: H.60 Ligands: ACT.5 2 PLIP interactions: 1 interactions with chain C, 1 Ligand-Ligand interactions Metal complexes: C:H.60, ACT.5

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 6 residues within 4Å: Chain A: V.55, H.60, E.180 Chain B: K.129, Y.131 Ligands: ZN.1 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:Y.131 Salt bridges: B:K.129, A:H.60 ACT.5: 3 residues within 4Å: Chain C: H.60, I.61 Ligands: ZN.4 2 PLIP interactions: 2 interactions with chain C Hydrophobic interactions: C:I.61 Salt bridges: C:H.60

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Burmeister, W.P. et al., Crystal Structure of Species D Adenovirus Fiber Knobs and Their Sialic Acid Binding Sites. J.Virol. (2004)

Release Date

2004-07-02

Peptides

FIBER PROTEIN: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

FIBER PROTEIN

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