- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)
- 4 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
NAP.2: 32 residues within 4Å:- Chain A: I.164, T.165, P.166, F.167, N.168, K.191, P.192, S.193, I.194, L.222, P.223, G.224, K.225, A.227, E.228, F.241, T.242, G.243, S.244, V.247, R.250, V.251, E.263, L.264, G.265, G.266, C.297, E.395, F.397, L.423, H.455, F.462
17 PLIP interactions:17 interactions with chain A- Hydrophobic interactions: A:T.242
- Hydrogen bonds: A:T.165, A:F.167, A:I.194, A:G.224, A:E.228, A:S.244, A:E.263, A:G.265, A:G.266, A:E.395, A:H.455
- Water bridges: A:S.193, A:S.195, A:S.195, A:T.245
- Salt bridges: A:K.191
NAP.5: 32 residues within 4Å:- Chain B: I.164, T.165, P.166, F.167, N.168, K.191, P.192, S.193, I.194, L.222, P.223, G.224, K.225, A.227, E.228, F.241, T.242, G.243, S.244, V.247, R.250, V.251, E.263, L.264, G.265, G.266, C.297, E.395, F.397, L.423, H.455, F.462
18 PLIP interactions:18 interactions with chain B- Hydrophobic interactions: B:T.242
- Hydrogen bonds: B:T.165, B:F.167, B:I.194, B:G.224, B:E.228, B:E.228, B:S.244, B:E.263, B:E.263, B:G.265, B:G.266, B:E.395
- Water bridges: B:S.193, B:S.195, B:S.195, B:T.245
- Salt bridges: B:K.191
NAP.8: 32 residues within 4Å:- Chain C: I.164, T.165, P.166, F.167, N.168, K.191, P.192, S.193, I.194, L.222, P.223, G.224, K.225, A.227, E.228, F.241, T.242, G.243, S.244, V.247, R.250, V.251, E.263, L.264, G.265, G.266, C.297, E.395, F.397, L.423, H.455, F.462
17 PLIP interactions:17 interactions with chain C- Hydrophobic interactions: C:T.242
- Hydrogen bonds: C:T.165, C:F.167, C:I.194, C:G.224, C:E.228, C:S.244, C:E.263, C:G.265, C:G.266, C:E.395, C:H.455
- Water bridges: C:S.193, C:S.195, C:S.195, C:T.245
- Salt bridges: C:K.191
NAP.11: 32 residues within 4Å:- Chain D: I.164, T.165, P.166, F.167, N.168, K.191, P.192, S.193, I.194, L.222, P.223, G.224, K.225, A.227, E.228, F.241, T.242, G.243, S.244, V.247, R.250, V.251, E.263, L.264, G.265, G.266, C.297, E.395, F.397, L.423, H.455, F.462
18 PLIP interactions:18 interactions with chain D- Hydrophobic interactions: D:T.242
- Hydrogen bonds: D:T.165, D:F.167, D:I.194, D:G.224, D:E.228, D:E.228, D:S.244, D:E.263, D:E.263, D:G.265, D:G.266, D:E.395
- Water bridges: D:S.193, D:S.195, D:S.195, D:T.245
- Salt bridges: D:K.191
- 4 x NA: SODIUM ION(Non-functional Binders)
NA.3: 3 residues within 4Å:- Chain A: G.255, G.256
- Chain B: E.249
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:G.255
NA.6: 3 residues within 4Å:- Chain A: E.249
- Chain B: G.255, G.256
2 PLIP interactions:1 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:G.255
- Water bridges: A:E.249
NA.9: 3 residues within 4Å:- Chain C: G.255, G.256
- Chain D: E.249
1 PLIP interactions:1 interactions with chain D- Hydrogen bonds: D:E.249
NA.12: 3 residues within 4Å:- Chain C: E.249
- Chain D: G.255, G.256
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:E.249
- Water bridges: C:E.249
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lorentzen, E. et al., Structural Basis of Allosteric Regulation and Substrate Specificity of the Non-Phosphorylating Glyceraldehyde 3-Phosphate Dehydrogenase from Thermoproteus Tenax. J.Mol.Biol. (2004)
- Release Date
- 2004-08-05
- Peptides
- GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (NADP+): ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)
- 4 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- 4 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lorentzen, E. et al., Structural Basis of Allosteric Regulation and Substrate Specificity of the Non-Phosphorylating Glyceraldehyde 3-Phosphate Dehydrogenase from Thermoproteus Tenax. J.Mol.Biol. (2004)
- Release Date
- 2004-08-05
- Peptides
- GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (NADP+): ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A