SMTL ID : 1v3s.1

Crystal structure of TT1020 from Thermus thermophilus HB8

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-trimer

Ligands

3 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.1: 22 residues within 4Å: Chain A: I.7, G.35, H.36, G.37, G.38, E.39, K.58, E.85, V.86, G.87, D.88, G.89, K.90, F.92 Chain B: G.27, L.28, T.29, E.62, I.63, G.64, R.101, R.103 18 PLIP interactions: 13 interactions with chain A, 5 interactions with chain B Hydrogen bonds: A:G.38, A:E.39, A:E.39, A:G.87, A:D.88, A:G.89, A:K.90, B:G.64, B:G.64 Water bridges: A:K.58, A:K.58, B:G.27 Salt bridges: A:K.90, A:K.90, A:K.90, B:R.101, B:R.103 pi-Stacking: A:F.92 ATP.2: 19 residues within 4Å: Chain B: I.7, G.35, H.36, G.37, K.58, V.86, G.87, D.88, G.89, K.90, F.92 Chain C: G.27, L.28, T.29, E.62, I.63, G.64, R.101, R.103 16 PLIP interactions: 7 interactions with chain C, 9 interactions with chain B Hydrogen bonds: C:T.29, C:G.64, C:G.64, B:G.87, B:D.88, B:G.89, B:K.90 Water bridges: C:G.27, B:G.89 Salt bridges: C:R.101, C:R.101, C:R.103, B:K.90, B:K.90, B:K.90 pi-Stacking: B:F.92 ATP.3: 19 residues within 4Å: Chain A: G.27, L.28, T.29, E.62, I.63, G.64, R.101, R.103 Chain C: I.7, G.35, H.36, G.37, K.58, V.86, G.87, D.88, G.89, K.90, F.92 17 PLIP interactions: 10 interactions with chain C, 7 interactions with chain A Hydrogen bonds: C:G.87, C:G.89, C:K.90, A:T.29, A:G.64, A:G.64, A:R.103 Water bridges: C:G.37, C:G.89, C:K.90, A:I.102 Salt bridges: C:K.90, C:K.90, C:K.90, A:R.101, A:R.103 pi-Stacking: C:F.92

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sakai, H. et al., Crystal structures of the signal transducing protein GlnK from Thermus thermophilus HB8. J.Struct.Biol. (2005)

Release Date

2004-11-23

Peptides

Nitrogen regulatory protein P-II: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Nitrogen regulatory protein P-II

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